Cost-Pragmatic Quality Gating and Selection-Fusion Multi-Model Combiners for BioASQ Phases A+ and B
For participants in biomedical question answering challenges, this work provides practical design principles for retrieval and multi-model combination, though the gains are incremental and domain-specific.
The paper presents a BioASQ 2026 system with two key innovations: a cost-pragmatic re-retrieval policy that improves list F1 by +0.132 absolute at 12% lower cost, and a selection-fusion decomposition of multi-model ensembles that predicts LLM-as-judge wins on selection-dominated metrics but is insufficient for recall. The system achieves first place on three of eight leaderboards in the BioASQ 14B 2026 preliminary evaluation.
We describe our BioASQ Task 14B 2026 system. The work centers on two design decisions: how aggressively to re-retrieve when first-stage retrieval is weak, and how to combine multiple language-model answers. Retrieval unions two parallel pipelines - a hybrid first stage (dense BGE + BM25 + RRF, reaching R@200 = 99.3% on the BioASQ-13b historical archive) and an agent-driven pipeline that decomposes the question over PubMed, Europe PMC, and iCite - with a BGE cross-encoder quality gate flagging weakly-supported questions for selective re-retrieval. On Task 12B 2024 validation, a cost-pragmatic re-retrieval policy beats a skill-strict baseline significantly on list F1 and list precision, at 12% lower re-retrieval cost. Holding prompt and model fixed across val and test 13B (different question sets), list F1 rises by +0.132 absolute on the BioASQ-released gold-input pool, consistent with substantial retrieval-side headroom. For Phase B answering we decompose multi-model ensemble lift into a selection component bounded by the per-question oracle and a fusion component that aggregators can exceed. The decomposition predicts before any experiment that LLM-as-judge wins on selection-dominated metrics (yes/no, multi-reference ROUGE) but is structurally insufficient on the recall component of fusion-friendly metrics (factoid rank-1, list recall). On Task 13B 2025 our synonym-union resolver wins list recall on every head, while GPT-5.5 solo retains the list-F1 lead because the resolver's wider item set costs precision. On the Task 14B 2026 preliminary leaderboard our team places first on the combined-exact aggregate on three of the eight (phase x batch) leaderboards, wins four individual question-type cells, and takes #1 on Phase B b3 ideal.