Diego Elias Costa

SayedHassan Khatoonabadi, Ahmad Abdellatif, Diego Elias Costa et al.

The success of a Pull Request (PR) depends on the responsiveness of the maintainers and the contributor during the review process. Being aware of the expected waiting times can lead to better interactions and managed expectations for both the maintainers and the contributor. In this paper, we propose a machine-learning approach to predict the first response latency of the maintainers following the submission of a PR, and the first response latency of the contributor after receiving the first response from the maintainers. We curate a dataset of 20 large and popular open-source projects on GitHub and extract 21 features to characterize projects, contributors, PRs, and review processes. Using these features, we then evaluate seven types of classifiers to identify the best-performing models. We also conduct permutation feature importance and SHAP analyses to understand the importance and the impact of different features on the predicted response latencies. We find that our CatBoost models are the most effective for predicting the first response latencies of both maintainers and contributors. We also observe that PRs submitted earlier in the week, containing an average number of commits, and with concise descriptions are more likely to receive faster first responses from the maintainers. Similarly, PRs with a lower first response latency from maintainers, that received the first response of maintainers earlier in the week, and containing an average number of commits tend to receive faster first responses from the contributors. Additionally, contributors with a higher acceptance rate and a history of timely responses in the project are likely to both obtain and provide faster first responses. Moreover, we show the effectiveness of our approach in a cross-project setting.

Sharon Chee Yin Ho, Vahid Majdinasab, Mohayeminul Islam et al.

Software systems are increasingly relying on deep learning components, due to their remarkable capability of identifying complex data patterns and powering intelligent behaviour. A core enabler of this change in software development is the availability of easy-to-use deep learning libraries. Libraries like PyTorch and TensorFlow empower a large variety of intelligent systems, offering a multitude of algorithms and configuration options, applicable to numerous domains of systems. However, bugs in those popular deep learning libraries also may have dire consequences for the quality of systems they enable; thus, it is important to understand how bugs are identified and fixed in those libraries. Inspired by a study of Jia et al., which investigates the bug identification and fixing process at TensorFlow, we characterize bugs in the PyTorch library, a very popular deep learning framework. We investigate the causes and symptoms of bugs identified during PyTorch's development, and assess their locality within the project, and extract patterns of bug fixes. Our results highlight that PyTorch bugs are more like traditional software projects bugs, than related to deep learning characteristics. Finally, we also compare our results with the study on TensorFlow, highlighting similarities and differences across the bug identification and fixing process.

Khaled Badran, Pierre-Olivier Côté, Amanda Kolopanis et al.

As machine learning (ML) systems get adopted in more critical areas, it has become increasingly crucial to address the bias that could occur in these systems. Several fairness pre-processing algorithms are available to alleviate implicit biases during model training. These algorithms employ different concepts of fairness, often leading to conflicting strategies with consequential trade-offs between fairness and accuracy. In this work, we evaluate three popular fairness pre-processing algorithms and investigate the potential for combining all algorithms into a more robust pre-processing ensemble. We report on lessons learned that can help practitioners better select fairness algorithms for their models.

SayedHassan Khatoonabadi, Diego Elias Costa, Suhaib Mujahid et al.

Pull Requests (PRs) that are neither progressed nor resolved clutter the list of PRs, making it difficult for the maintainers to manage and prioritize unresolved PRs. To automatically track, follow up, and close such inactive PRs, Stale bot was introduced by GitHub. Despite its increasing adoption, there are ongoing debates on whether using Stale bot alleviates or exacerbates the problem of inactive PRs. To better understand if and how Stale bot helps projects in their pull-based development workflow, we perform an empirical study of 20 large and popular open-source projects. We find that Stale bot can help deal with a backlog of unresolved PRs as the projects closed more PRs within the first few months of adoption. Moreover, Stale bot can help improve the efficiency of the PR review process as the projects reviewed PRs that ended up merged and resolved PRs that ended up closed faster after the adoption. However, Stale bot can also negatively affect the contributors as the projects experienced a considerable decrease in their number of active contributors after the adoption. Therefore, relying solely on Stale bot to deal with inactive PRs may lead to decreased community engagement and an increased probability of contributor abandonment.

SayedHassan Khatoonabadi, Diego Elias Costa, Rabe Abdalkareem et al.

Pull-based development has enabled numerous volunteers to contribute to open-source projects with fewer barriers. Nevertheless, a considerable amount of pull requests (PRs) with valid contributions are abandoned by their contributors, wasting the effort and time put in by both the contributors and maintainers. To better understand the underlying dynamics of contributor-abandoned PRs, we conduct a mixed-methods study using both quantitative and qualitative methods. We curate a dataset consisting of 265,325 PRs including 4,450 abandoned ones from ten popular and mature GitHub projects and measure 16 features characterizing PRs, contributors, review processes, and projects. Using statistical and machine learning techniques, we find that complex PRs, novice contributors, and lengthy reviews have a higher probability of abandonment and the rate of PR abandonment fluctuates alongside the projects' maturity or workload. To identify why contributors abandon their PRs, we also manually examine a random sample of 354 abandoned PRs. We observe that the most frequent abandonment reasons are related to the obstacles faced by contributors, followed by the hurdles imposed by maintainers during the review process. Finally, we survey the top core maintainers of the studied projects to understand their perspectives on dealing with PR abandonment and on our findings.

Mahmoud Alfadel, Diego Elias Costa, Mouafak Mokhallalati et al.

Software vulnerabilities have a large negative impact on the software systems that we depend on daily. Reports on software vulnerabilities always paint a grim picture, with some reports showing that 83% of organizations depend on vulnerable software. However, our experience leads us to believe that, in the grand scheme of things, these software vulnerabilities may have less impact than what is reported. Therefore, we perform a study to better understand the threat of npm vulnerable packages used in Node.js applications. We define three threat levels for vulnerabilities in packages, based on their lifecycle, where a package vulnerability is assigned a low threat level if it was hidden or still unknown at the time it was used in the dependent application (t), medium threat level if the vulnerability was reported but not yet published at t, and high if it was publicly announced at t. Then, we perform an empirical study involving 6,673 real-world, active, and mature open source Node.js applications. Our findings show that although 67.93% of the examined applications depend on at least one vulnerable package, 94.91% of the vulnerable packages in those affected applications are classified as having low threat. Moreover, we find that in the case of vulnerable packages classified as having high threat, it is the application's lack of updating that makes them vulnerable, i.e., it is not the existence of the vulnerability that is the real problem. Furthermore, we verify our findings at different stages of the application's lifetime and find that our findings still hold. Our study argues that when it comes to software vulnerabilities, things may not be as bad as they seem and that considering vulnerability threat is key.

Seif Mzoughi, Ahmed Haj yahmed, Mohamed Elshafei et al.

Deep Learning (DL) systems are increasingly deployed in safety-critical applications, yet they remain vulnerable to robustness issues that can lead to significant failures. While numerous Test Input Generators (TIGs) have been developed to evaluate DL robustness, a comprehensive assessment of their effectiveness across different dimensions is still lacking. This paper presents a comprehensive assessment of four state-of-the-art TIGs--DeepHunter, DeepFault, AdvGAN, and SinVAD--across multiple critical aspects: fault-revealing capability, naturalness, diversity, and efficiency. Our empirical study leverages three pre-trained models (LeNet-5, VGG16, and EfficientNetB3) on datasets of varying complexity (MNIST, CIFAR-10, and ImageNet-1K) to evaluate TIG performance. Our findings reveal important trade-offs in robustness revealing capability, variation in test case generation, and computational efficiency across TIGs. The results also show that TIG performance varies significantly with dataset complexity, as tools that perform well on simpler datasets may struggle with more complex ones. In contrast, others maintain steadier performance or better scalability. This paper offers practical guidance for selecting appropriate TIGs aligned with specific objectives and dataset characteristics. Nonetheless, more work is needed to address TIG limitations and advance TIGs for real-world, safety-critical systems.

Simon Eismann, Diego Elias Costa, Lizhi Liao et al.

Context. While in serverless computing, application resource management and operational concerns are generally delegated to the cloud provider, ensuring that serverless applications meet their performance requirements is still a responsibility of the developers. Performance testing is a commonly used performance assessment practice; however, it traditionally requires visibility of the resource environment. Objective. In this study, we investigate whether performance tests of serverless applications are stable, that is, if their results are reproducible, and what implications the serverless paradigm has for performance tests. Method. We conduct a case study where we collect two datasets of performance test results: (a) repetitions of performance tests for varying memory size and load intensities and (b) three repetitions of the same performance test every day for ten months. Results. We find that performance tests of serverless applications are comparatively stable if conducted on the same day. However, we also observe short-term performance variations and frequent long-term performance changes. Conclusion. Performance tests for serverless applications can be stable; however, the serverless model impacts the planning, execution, and analysis of performance tests.

Suhaib Mujahid, Diego Elias Costa, Rabe Abdalkareem et al.

Due to their increasing complexity, today's software systems are frequently built by leveraging reusable code in the form of libraries and packages. Software ecosystems (e.g., npm) are the primary enablers of this code reuse, providing developers with a platform to share their own and use others' code. These ecosystems evolve rapidly: developers add new packages every day to solve new problems or provide alternative solutions, causing obsolete packages to decline in their importance to the community. Developers should avoid depending on packages in decline, as these packages are reused less over time and may become less frequently maintained. However, current popularity metrics (e.g., Stars, and Downloads) are not fit to provide this information to developers because their semantics do not aptly capture shifts in the community interest. In this paper, we propose a scalable approach that uses the package's centrality in the ecosystem to identify packages in decline. We evaluate our approach with the npm ecosystem and show that the trends of centrality over time can correctly distinguish packages in decline with an ROC-AUC of 0.9. The approach can capture 87% of the packages in decline, on average 18 months before the trend is shown in currently used package popularity metrics. We implement this approach in a tool that can be used to augment the npms metrics and help developers avoid packages in decline when reusing packages from npm.

Ahmad Abdellatif, Khaled Badran, Diego Elias Costa et al.

Chatbots are envisioned to dramatically change the future of Software Engineering, allowing practitioners to chat and inquire about their software projects and interact with different services using natural language. At the heart of every chatbot is a Natural Language Understanding (NLU) component that enables the chatbot to understand natural language input. Recently, many NLU platforms were provided to serve as an off-the-shelf NLU component for chatbots, however, selecting the best NLU for Software Engineering chatbots remains an open challenge. Therefore, in this paper, we evaluate four of the most commonly used NLUs, namely IBM Watson, Google Dialogflow, Rasa, and Microsoft LUIS to shed light on which NLU should be used in Software Engineering based chatbots. Specifically, we examine the NLUs' performance in classifying intents, confidence scores stability, and extracting entities. To evaluate the NLUs, we use two datasets that reflect two common tasks performed by Software Engineering practitioners, 1) the task of chatting with the chatbot to ask questions about software repositories 2) the task of asking development questions on Q&A forums (e.g., Stack Overflow). According to our findings, IBM Watson is the best performing NLU when considering the three aspects (intents classification, confidence scores, and entity extraction). However, the results from each individual aspect show that, in intents classification, IBM Watson performs the best with an F1-measure > 84%, but in confidence scores, Rasa comes on top with a median confidence score higher than 0.91. Our results also show that all NLUs, except for Dialogflow, generally provide trustable confidence scores. For entity extraction, Microsoft LUIS and IBM Watson outperform other NLUs in the two SE tasks. Our results provide guidance to software engineering practitioners when deciding which NLU to use in their chatbots.

Abbas Javan Jafari, Diego Elias Costa, Rabe Abdalkareem et al.

Dependency management in modern software development poses many challenges for developers who wish to stay up to date with the latest features and fixes whilst ensuring backwards compatibility. Project maintainers have opted for varied, and sometimes conflicting, approaches for maintaining their dependencies. Opting for unsuitable approaches can introduce bugs and vulnerabilities into the project, introduce breaking changes, cause extraneous installations, and reduce dependency understandability, making it harder for others to contribute effectively. In this paper, we empirically examine evidence of recurring dependency management issues (dependency smells). We look at the commit data for a dataset of 1,146 active JavaScript repositories to catalog, quantify and understand dependency smells. Through a series of surveys with practitioners, we identify and quantify seven dependency smells with varying degrees of popularity and investigate why they are introduced throughout project history. Our findings indicate that dependency smells are prevalent in JavaScript projects with two or more distinct smells appearing in 80% of the projects, but they generally infect a minority of a project's dependencies. Our observations show that the number of dependency smells tend to increase over time. Practitioners agree that dependency smells bring about many problems including security threats, bugs, dependency breakage, runtime errors, and other maintenance issues. These smells are generally introduced as developers react to dependency misbehaviour and the shortcomings of the npm ecosystem.

Diego Elias Costa, Suhaib Mujahid, Rabe Abdalkareem et al.

A decade after its first release, the Go programming language has become a major programming language in the development landscape. While praised for its clean syntax and C-like performance, Go also contains a strong static type-system that prevents arbitrary type casting and arbitrary memory access, making the language type-safe by design. However, to give developers the possibility of implementing low-level code, Go ships with a special package called unsafe that offers developers a way around the type-safety of Go programs. The package gives greater flexibility to developers but comes at a higher risk of runtime errors, chances of non-portability, and the loss of compatibility guarantees for future versions of Go. In this paper, we present the first large-scale study on the usage of the unsafe package in 2,438 popular Go projects. Our investigation shows that unsafe is used in 24% of Go projects, motivated primarily by communicating with operating systems and C code, but is also commonly used as a source of performance optimization. Developers are willing to use unsafe to break language specifications (e.g., string immutability) for better performance and 6% of analyzed projects that use unsafe perform risky pointer conversions that can lead to program crashes and unexpected behavior. Furthermore, we report a series of real issues faced by projects that use unsafe, from crashing errors and non-deterministic behavior to having their deployment restricted from certain popular environments. Our findings can be used to understand how and why developers break type-safety in Go, and help motivate further tools and language development that could make the usage of unsafe in Go even safer.

Artur Andrzejak, Oliver Wenz, Diego Costa

Data analysis is at the core of scientific studies, a prominent task that researchers and practitioners typically undertake by programming their own set of automated scripts. While there is no shortage of tools and languages available for designing data analysis pipelines, users spend substantial effort in learning the specifics of such languages/tools and often design solutions too project specific to be reused in future studies. Furthermore, users need to put further effort into making their code scalable, as parallel implementations are typically more complex. We address these problems by proposing an advanced code recommendation tool which facilitates developing data science scripts. Users formulate their intentions in a human-readable Domain Specific Language (DSL) for dataframe manipulation and analysis. The DSL statements can be converted into executable Python code during editing. To avoid the need to learn the DSL and increase user-friendliness, our tool supports code completion in mainstream IDEs and editors. Moreover, DSL statements can generate executable code for different data analysis frameworks (currently we support Pandas and PySpark). Overall, our approach attempts to accelerate programming of common data analysis tasks and to facilitate the conversion of the implementations between frameworks. In a preliminary assessment based on a popular data processing tutorial, our tool was able to fully cover 9 out of 14 processing steps for Pandas and 10 out of 16 for PySpark, while partially covering 4 processing steps for each of the frameworks.