Yu Jiang

Yingwei Ma, Yue Liu, Yue Yu et al.

Large Language Models (LLMs) have exhibited remarkable reasoning capabilities and become the foundation of language technologies. Inspired by the great success of code data in training LLMs, we naturally wonder at which training stage introducing code data can really help LLMs reasoning. To this end, this paper systematically explores the impact of code data on LLMs at different stages. Concretely, we introduce the code data at the pre-training stage, instruction-tuning stage, and both of them, respectively. Then, the reasoning capability of LLMs is comprehensively and fairly evaluated via six reasoning tasks in five domains. We critically analyze the experimental results and provide conclusions with insights. First, pre-training LLMs with the mixture of code and text can significantly enhance LLMs' general reasoning capability almost without negative transfer on other tasks. Besides, at the instruction-tuning stage, code data endows LLMs the task-specific reasoning capability. Moreover, the dynamic mixing strategy of code and text data assists LLMs to learn reasoning capability step-by-step during training. These insights deepen the understanding of LLMs regarding reasoning ability for their application, such as scientific question answering, legal support, etc. The source code and model parameters are released at the link:~\url{https://github.com/yingweima2022/CodeLLM}.

Puzhuo Liu, Yuhan Huang, Jianlei Chi et al.

Binary decompilation aims to recover binaries into high-level source code, but existing evaluations mainly rely on syntactic similarity or single-axis readability metrics, which fail to capture practical reusability. We propose a reusability-driven evaluation paradigm that measures decompiler quality along three orthogonal dimensions: readability, recompilability, and functionality. We present DEBENCH, the first automated framework for multidimensional decompilation evaluation. DEBENCH contains 240 atomic test functions, organized into 8 source files and compiled into 640 binaries. It combines LLM-as-judge readability scoring with URAF (18 sub-dimensions), iterative compile-and-repair under a fixed 50-iteration budget, and Frida-based differential dynamic tracing at the program, function, and instruction levels. We evaluate five mainstream decompilers and three repair LLMs. Our study reveals four findings. First, the reusability cliff is steep: the best decompiler-LLM pair reaches 22.3% Exact+Partial program-level behavioral overlap but only 1.2% exact stdout match, nearly 50 points below recompilability. Second, settings that maximize readability do not maximize functionality: -O3 yields the lowest readability but the highest functionality, and Clang gives lower readability than GCC but 2.6x higher functionality. Third, cross-decompiler variation at the functional level is 20x, far larger than the 1.6x cross-LLM variation, showing that progress depends more on decompiler engines than larger repair models. Fourth, failures fall into three categories: syntactic noise, type-system collapse (about 19% of repair errors), and irreversible upstream losses such as ARM64 relocation idioms and C++ ABI features.

Xiaotian Hu, Mingxuan Liu, Junwei Huang et al.

Automated fetal ultrasound interpretation requires a workflow from visual perception, including plane recognition and anatomical segmentation, to clinical understanding, including biometric measurement and diagnostic reporting. However, the prevailing "one-task, one-model" paradigm limits systematic integration of evidence across this multi-step process. Although multimodal large language models (MLLMs) show promising visual understanding, their limited domain-specific grounding and hallucination risks restrict reliability in fetal ultrasound analysis. To address these limitations, we propose FetUSAgents, a tool-augmented multi-agent system for comprehensive fetal ultrasound interpretation, supporting visual question answering (VQA), report generation, image captioning, and video summarization. FetUSAgents coordinates task-specific visual tools through collaborative LLM agents and decomposes clinical queries into subtasks that progress from anatomical recognition to quantitative measurement. We further introduce Dual-Path Evidence Arbitration (DPEA), which integrates LLM-based deliberative reasoning with structured computational evidence from specialized visual tools. A retrieval-enhanced evidence bank consolidates intermediate findings to support traceable and clinically grounded conclusions. In addition, we construct FetUS-VQA, a dedicated VQA benchmark for fetal ultrasound, comprising 1,892 images and 3,205 question-answer pairs across 10 clinical tasks. Extensive out-of-distribution experiments show that FetUSAgents outperforms general and medical MLLMs, exceeding the strongest baseline by more than 25 percent in VQA accuracy. These results suggest a scalable route toward evidence-driven clinical assistants for prenatal imaging. Code is available.

Nachuan Ma, Jiahe Fan, Wenshuo Wang et al.

Computer vision algorithms have been prevalently utilized for 3-D road imaging and pothole detection for over two decades. Nonetheless, there is a lack of systematic survey articles on state-of-the-art (SoTA) computer vision techniques, especially deep learning models, developed to tackle these problems. This article first introduces the sensing systems employed for 2-D and 3-D road data acquisition, including camera(s), laser scanners, and Microsoft Kinect. Afterward, it thoroughly and comprehensively reviews the SoTA computer vision algorithms, including (1) classical 2-D image processing, (2) 3-D point cloud modeling and segmentation, and (3) machine/deep learning, developed for road pothole detection. This article also discusses the existing challenges and future development trends of computer vision-based road pothole detection approaches: classical 2-D image processing-based and 3-D point cloud modeling and segmentation-based approaches have already become history; and Convolutional neural networks (CNNs) have demonstrated compelling road pothole detection results and are promising to break the bottleneck with the future advances in self/un-supervised learning for multi-modal semantic segmentation. We believe that this survey can serve as practical guidance for developing the next-generation road condition assessment systems.

Hui Kong, Sergiy Bogomolov, Christian Schilling et al.

In this paper, we propose an approach to automatically compute invariant clusters for semialgebraic hybrid systems. An invariant cluster for an ordinary differential equation (ODE) is a multivariate polynomial invariant g(u,x)=0, parametric in u, which can yield an infinite number of concrete invariants by assigning different values to u so that every trajectory of the system can be overapproximated precisely by a union of concrete invariants. For semialgebraic systems, which involve ODEs with multivariate polynomial vector flow, invariant clusters can be obtained by first computing the remainder of the Lie derivative of a template multivariate polynomial w.r.t. its Groebner basis and then solving the system of polynomial equations obtained from the coefficients of the remainder. Based on invariant clusters and sum-of-squares (SOS) programming, we present a new method for the safety verification of hybrid systems. Experiments on nonlinear benchmark systems from biology and control theory show that our approach is effective and efficient.

Yingwei Ma, Yue Yu, Shanshan Li et al.

Large language models (LLMs) have showcased remarkable prowess in code generation. However, automated code generation is still challenging since it requires a high-level semantic mapping between natural language requirements and codes. Most existing LLMs-based approaches for code generation rely on decoder-only causal language models often treate codes merely as plain text tokens, i.e., feeding the requirements as a prompt input, and outputing code as flat sequence of tokens, potentially missing the rich semantic features inherent in source code. To bridge this gap, this paper proposes the "Semantic Chain-of-Thought" approach to intruduce semantic information of code, named SeCoT. Our motivation is that the semantic information of the source code (\eg data flow and control flow) describes more precise program execution behavior, intention and function. By guiding LLM consider and integrate semantic information, we can achieve a more granular understanding and representation of code, enhancing code generation accuracy. Meanwhile, while traditional techniques leveraging such semantic information require complex static or dynamic code analysis to obtain features such as data flow and control flow, SeCoT demonstrates that this process can be fully automated via the intrinsic capabilities of LLMs (i.e., in-context learning), while being generalizable and applicable to challenging domains. While SeCoT can be applied with different LLMs, this paper focuses on the powerful GPT-style models: ChatGPT(close-source model) and WizardCoder(open-source model). The experimental study on three popular DL benchmarks (i.e., HumanEval, HumanEval-ET and MBPP) shows that SeCoT can achieves state-of-the-art performance, greatly improving the potential for large models and code generation.

Shengqin Wang, Yongji Zhang, Minghao Zhao et al.

Skeleton-based action recognition methods are limited by the semantic extraction of spatio-temporal skeletal maps. However, current methods have difficulty in effectively combining features from both temporal and spatial graph dimensions and tend to be thick on one side and thin on the other. In this paper, we propose a Temporal-Channel Aggregation Graph Convolutional Networks (TCA-GCN) to learn spatial and temporal topologies dynamically and efficiently aggregate topological features in different temporal and channel dimensions for skeleton-based action recognition. We use the Temporal Aggregation module to learn temporal dimensional features and the Channel Aggregation module to efficiently combine spatial dynamic channel-wise topological features with temporal dynamic topological features. In addition, we extract multi-scale skeletal features on temporal modeling and fuse them with an attention mechanism. Extensive experiments show that our model results outperform state-of-the-art methods on the NTU RGB+D, NTU RGB+D 120, and NW-UCLA datasets.

Yusen Wang, Zongcheng Li, Yu Jiang et al.

We present a novel neural surface reconstruction method called NeuralRoom for reconstructing room-sized indoor scenes directly from a set of 2D images. Recently, implicit neural representations have become a promising way to reconstruct surfaces from multiview images due to their high-quality results and simplicity. However, implicit neural representations usually cannot reconstruct indoor scenes well because they suffer severe shape-radiance ambiguity. We assume that the indoor scene consists of texture-rich and flat texture-less regions. In texture-rich regions, the multiview stereo can obtain accurate results. In the flat area, normal estimation networks usually obtain a good normal estimation. Based on the above observations, we reduce the possible spatial variation range of implicit neural surfaces by reliable geometric priors to alleviate shape-radiance ambiguity. Specifically, we use multiview stereo results to limit the NeuralRoom optimization space and then use reliable geometric priors to guide NeuralRoom training. Then the NeuralRoom would produce a neural scene representation that can render an image consistent with the input training images. In addition, we propose a smoothing method called perturbation-residual restrictions to improve the accuracy and completeness of the flat region, which assumes that the sampling points in a local surface should have the same normal and similar distance to the observation center. Experiments on the ScanNet dataset show that our method can reconstruct the texture-less area of indoor scenes while maintaining the accuracy of detail. We also apply NeuralRoom to more advanced multiview reconstruction algorithms and significantly improve their reconstruction quality.

Shengqin Wang, Yongji Zhang, Hong Qi et al.

Skeleton-based action recognition relies on the extraction of spatial-temporal topological information. Hypergraphs can establish prior unnatural dependencies for the skeleton. However, the existing methods only focus on the construction of spatial topology and ignore the time-point dependence. This paper proposes a dynamic spatial-temporal hypergraph convolutional network (DST-HCN) to capture spatial-temporal information for skeleton-based action recognition. DST-HCN introduces a time-point hypergraph (TPH) to learn relationships at time points. With multiple spatial static hypergraphs and dynamic TPH, our network can learn more complete spatial-temporal features. In addition, we use the high-order information fusion module (HIF) to fuse spatial-temporal information synchronously. Extensive experiments on NTU RGB+D, NTU RGB+D 120, and NW-UCLA datasets show that our model achieves state-of-the-art, especially compared with hypergraph methods.

Ertai Liu, Josephine Monica, Kaitlin Gold et al.

Autonomous navigation is the key to achieving the full automation of agricultural research and production management (e.g., disease management and yield prediction) using agricultural robots. In this paper, we introduced a vision-based autonomous navigation framework for agriculture robots in trellised cropping systems such as vineyards. To achieve this, we proposed a novel learning-based method to estimate the path traversibility heatmap directly from an RGB-D image and subsequently convert the heatmap to a preferred traversal path. An automatic annotation pipeline was developed to form a training dataset by projecting RTK GPS paths collected during the first setup in a vineyard in corresponding RGB-D images as ground-truth path annotations, allowing a fast model training and fine-tuning without costly human annotation. The trained path detection model was used to develop a full navigation framework consisting of row tracking and row switching modules, enabling a robot to traverse within a crop row and transit between crop rows to cover an entire vineyard autonomously. Extensive field trials were conducted in three different vineyards to demonstrate that the developed path detection model and navigation framework provided a cost-effective, accurate, and robust autonomous navigation solution in the vineyard and could be generalized to unseen vineyards with stable performance.

Quan Zhang, Lianhang Fu, Lvsi Lian et al.

Equipping LLM agents with real-world tools can substantially improve productivity. However, granting agents autonomy over tool use also transfers the associated privileges to both the agent and the underlying LLM. Improper privilege usage may lead to serious consequences, including information leakage and infrastructure damage. While several benchmarks have been built to study agents' security, they often rely on pre-coded tools and restricted interaction patterns. Such crafted environments differ substantially from the real-world, making it hard to assess agents' security capabilities in critical privilege control and usage. Therefore, we propose GrantBox, a security evaluation sandbox for analyzing agent privilege usage. GrantBox automatically integrates real-world tools and allows LLM agents to invoke genuine privileges, enabling the evaluation of privilege usage under prompt injection attacks. Our results indicate that while LLMs exhibit basic security awareness and can block some direct attacks, they remain vulnerable to more sophisticated attacks, resulting in an average attack success rate of 84.80% in carefully crafted scenarios.

Mingzhuang Hua, Francisco Camara Pereira, Yu Jiang et al.

The urban transportation system is a combination of multiple transport modes, and the interdependencies across those modes exist. This means that the travel demand across different travel modes could be correlated as one mode may receive demand from or create demand for another mode, not to mention natural correlations between different demand time series due to general demand flow patterns across the network. It is expectable that cross-modal ripple effects become more prevalent, with Mobility as a Service. Therefore, by propagating demand data across modes, a better demand prediction could be obtained. To this end, this study explores various machine learning models and transfer learning strategies for cross-modal demand prediction. The trip data of bike-share, metro, and taxi are processed as the station-level passenger flows, and then the proposed prediction method is tested in the large-scale case studies of Nanjing and Chicago. The results suggest that prediction models with transfer learning perform better than unimodal prediction models. Furthermore, stacked Long Short-Term Memory model performs particularly well in cross-modal demand prediction. These results verify our combined method's forecasting improvement over existing benchmarks and demonstrate the good transferability for cross-modal demand prediction in multiple cities.

Yue Huang, Yu Jiang, Wenjie Wang et al.

Multi-agent systems composed of large generative models are rapidly moving from laboratory prototypes to real-world deployments, where they jointly plan, negotiate, and allocate shared resources to solve complex tasks. While such systems promise unprecedented scalability and autonomy, their collective interaction also gives rise to failure modes that cannot be reduced to individual agents. Understanding these emergent risks is therefore critical. Here, we present a pioneer study of such emergent multi-agent risk in workflows that involve competition over shared resources (e.g., computing resources or market share), sequential handoff collaboration (where downstream agents see only predecessor outputs), collective decision aggregation, and others. Across these settings, we observe that such group behaviors arise frequently across repeated trials and a wide range of interaction conditions, rather than as rare or pathological cases. In particular, phenomena such as collusion-like coordination and conformity emerge with non-trivial frequency under realistic resource constraints, communication protocols, and role assignments, mirroring well-known pathologies in human societies despite no explicit instruction. Moreover, these risks cannot be prevented by existing agent-level safeguards alone. These findings expose the dark side of intelligent multi-agent systems: a social intelligence risk where agent collectives, despite no instruction to do so, spontaneously reproduce familiar failure patterns from human societies.

Xueru Wen, Changjiang Zhou, Haotian Tang et al.

Named entity recognition is a traditional task in natural language processing. In particular, nested entity recognition receives extensive attention for the widespread existence of the nesting scenario. The latest research migrates the well-established paradigm of set prediction in object detection to cope with entity nesting. However, the manual creation of query vectors, which fail to adapt to the rich semantic information in the context, limits these approaches. An end-to-end entity detection approach with proposer and regressor is presented in this paper to tackle the issues. First, the proposer utilizes the feature pyramid network to generate high-quality entity proposals. Then, the regressor refines the proposals for generating the final prediction. The model adopts encoder-only architecture and thus obtains the advantages of the richness of query semantics, high precision of entity localization, and easiness of model training. Moreover, we introduce the novel spatially modulated attention and progressive refinement for further improvement. Extensive experiments demonstrate that our model achieves advanced performance in flat and nested NER, achieving a new state-of-the-art F1 score of 80.74 on the GENIA dataset and 72.38 on the WeiboNER dataset.

Huipeng Gu, Mingchao Cai, Jingzhi Li et al.

This paper introduces a unified model for thermo-poroelasticity and multiple-network poroelasticity, reformulated into a total-pressure-based system. We first establish the well-posedness of the problem via a Galerkin-based argument and subsequently introduce a robust space-time finite element approximation. To efficiently solve the fully coupled system, we propose a global-in-time iterative algorithm that sequentially decouples the mechanics from the transport equations, while incorporating necessary stabilization terms. We explicitly analyze the convergence rate and provide a rigorous proof that the proposed scheme constitutes a contraction mapping under physically relevant conditions, thereby ensuring its unconditional convergence. Numerical experiments confirm the theoretical stability bounds and demonstrate optimal convergence rates in both space and time, yielding solutions free of non-physical pressure oscillations.

Xiangzhi Tong, Chengrui Zhang, Mac Flaherty et al.

Cluster closure, defined as the progressive filling of gaps between the berries in a grape bunch, is a key trait in vineyard management, impacting disease risk. However, traditional visual scoring methods are labor-intensive, subjective, and lack temporal resolution. Existing datasets rarely support fine-grained berry-level analysis, limiting the development of robust deep learning models. In this work, we present ViViD-5k, a large-scale in-field Vineyard Vision Dataset containing 5,000 images with dense annotations, including over 648,000 berry centroids and cluster segmentation masks spanning 13 grape varieties. Building on this dataset, we introduce GrapeSAM, a two-stage visual pipeline that combines point-based berry localization with prompt-based segmentation using Segment Anything, followed by transformer-based cluster segmentation. The pipeline enables automated, in-field estimation of cluster closure with minimal supervision. Quantitative results demonstrate strong segmentation and counting accuracy across diverse conditions, while visualizations confirm robustness on both in-domain and out-of-domain samples. This work provides a scalable and objective alternative to manual compactness scoring and supports high-throughput grape phenotyping with enhanced spatial detail.

Yuzhuo Zhou, Chi Liu, Sheng Shen et al.

Automated diagnosis based on color fundus photography is essential for large-scale glaucoma screening. However, existing deep learning models are typically data-driven and lack explicit integration of retinal anatomical knowledge, which limits their robustness across heterogeneous clinical datasets. Moreover, pathological cues in fundus images may appear beyond predefined anatomical regions, making fixed-region feature extraction insufficient for reliable diagnosis. To address these challenges, we propose a retinal knowledge-oriented glaucoma screening framework that integrates dynamic multi-scale feature learning with domain-specific retinal priors. The framework adopts a tri-branch structure to capture complementary retinal representations, including global retinal context, structural features of the optic disc/cup, and dynamically localized pathological regions. A Dynamic Window Mechanism is devised to adaptively identify diagnostically informative regions, while a Knowledge-Enhanced Convolutional Attention Module incorporates retinal priors extracted from a pre-trained foundation model to guide attention learning. Extensive experiments on the large-scale AIROGS dataset demonstrate that the proposed method outperforms diverse baselines, achieving an AUC of 98.5% and an accuracy of 94.6%. Additional evaluations on multiple datasets from the SMDG-19 benchmark further confirm its strong cross-domain generalization capability, indicating that knowledge-guided attention combined with adaptive lesion localization can significantly improve the robustness of automated glaucoma screening systems.

Dawei Li, Qifan Liu, Yuxiao Guo et al.

DBMSs are complex systems prone to bugs that may lead to system failures or compromise data integrity. Establishing unified DBMS bug repositories is crucial for systematically organizing bug-related data, enabling code improvement, and supporting automated testing. In particular, bug reports often contain valuable test inputs and bug-triggering clues that help explore rare execution paths and expose critical buggy behavior, thereby guiding automated DBMS testing. However, the heterogeneity of bug reports, along with their incomplete or inaccurate content, makes it challenging to build unified repositories and convert them into high-quality test cases. In this paper, we propose BugForge, a framework that constructs standardized DBMS bug repositories and leverages them to generate high-quality test cases to enhance DBMS testing. Specifically, BugForge progressively collects bug reports, then employs syntax-aware processing and input-adaptive raw PoC extraction to construct a DBMS bug repository. The repository stores structured bug-related data, including bug metadata and raw PoCs that entail potential bug-triggering semantics. These data are further refined into high-quality test cases through semantic-guided adaptation, thereby enabling enhanced DBMS testing methods, including DBMS fuzzing, regression testing, and cross-DBMS bug discovery. We implemented BugForge for PostgreSQL, MySQL, MariaDB, and MonetDB, totally integrated 37,632 bug reports spanning up to 28 years. Based on the repository, BugForge uncovered 35 previously unknown bugs with 22 confirmed by developers, demonstrating the value of constructing and utilizing bug repositories for DBMS testing.

Yu Jiang, Hanwen Jiang, Ahmed Abdelkader et al.

With the emergence of 3D foundation models, there is growing interest in fine-tuning them for downstream tasks, where LoRA is the dominant fine-tuning paradigm. As 3D datasets exhibit distinct variations in texture, geometry, camera motion, and lighting, there are interesting fundamental questions: 1) Are there LoRA subspaces associated with each type of variation? 2) Are these subspaces disentangled (i.e., orthogonal to each other)? 3) How do we compute them effectively? This paper provides answers to all these questions. We introduce a robust approach that generates synthetic datasets with controlled variations, fine-tunes a LoRA adapter on each dataset, and extracts a LoRA sub-space associated with each type of variation. We show that these subspaces are approximately disentangled. Integrating them leads to a reduced LoRA subspace that enables efficient LoRA fine-tuning with improved prediction accuracy for downstream tasks. In particular, we show that such a reduced LoRA subspace, despite being derived entirely from synthetic data, generalizes to real datasets. An ablation study validates the effectiveness of the choices in our approach.

Xueru Wen, Changjiang Zhou, Haotian Tang et al.

Named entity recognition is a fundamental task in natural language processing, identifying the span and category of entities in unstructured texts. The traditional sequence labeling methodology ignores the nested entities, i.e. entities included in other entity mentions. Many approaches attempt to address this scenario, most of which rely on complex structures or have high computation complexity. The representation learning of the heterogeneous star graph containing text nodes and type nodes is investigated in this paper. In addition, we revise the graph attention mechanism into a hybrid form to address its unreasonableness in specific topologies. The model performs the type-supervised sequence labeling after updating nodes in the graph. The annotation scheme is an extension of the single-layer sequence labeling and is able to cope with the vast majority of nested entities. Extensive experiments on public NER datasets reveal the effectiveness of our model in extracting both flat and nested entities. The method achieved state-of-the-art performance on both flat and nested datasets. The significant improvement in accuracy reflects the superiority of the multi-layer labeling strategy.

Huigen Ye, Hongyan Wang, Hua Xu et al.

Integer programming problems (IPs) are challenging to be solved efficiently due to the NP-hardness, especially for large-scale IPs. To solve this type of IPs, Large neighborhood search (LNS) uses an initial feasible solution and iteratively improves it by searching a large neighborhood around the current solution. However, LNS easily steps into local optima and ignores the correlation between variables to be optimized, leading to compromised performance. This paper presents a general adaptive constraint partition-based optimization framework (ACP) for large-scale IPs that can efficiently use any existing optimization solver as a subroutine. Specifically, ACP first randomly partitions the constraints into blocks, where the number of blocks is adaptively adjusted to avoid local optima. Then, ACP uses a subroutine solver to optimize the decision variables in a randomly selected block of constraints to enhance the variable correlation. ACP is compared with LNS framework with different subroutine solvers on four IPs and a real-world IP. The experimental results demonstrate that in specified wall-clock time ACP shows better performance than SCIP and Gurobi.

Yue Huang, Zhengzhe Jiang, Yuchen Ma et al.

Understanding how and why large language models (LLMs) fail is becoming a central challenge as models rapidly evolve and static evaluations fall behind. While automated probing has been enabled by dynamic test generation, existing approaches often discover isolated failure cases, lack principled control over exploration, and provide limited insight into the underlying structure of model weaknesses. We propose ProbeLLM, a benchmark-agnostic automated probing framework that elevates weakness discovery from individual failures to structured failure modes. ProbeLLM formulates probing as a hierarchical Monte Carlo Tree Search, explicitly allocating limited probing budgets between global exploration of new failure regions and local refinement of recurring error patterns. By restricting probing to verifiable test cases and leveraging tool-augmented generation and verification, ProbeLLM grounds failure discovery in reliable evidence. Discovered failures are further consolidated into interpretable failure modes via failure-aware embeddings and boundary-aware induction. Across diverse benchmarks and LLMs, ProbeLLM reveals substantially broader, cleaner, and more fine-grained failure landscapes than static benchmarks and prior automated methods, supporting a shift from case-centric evaluation toward principled weakness discovery.

Cheng Wang, Yu Jiang, Zhihao Peng et al.

Functional Magnetic Resonance Imaging (fMRI) is essential for studying brain function and diagnosing neurological disorders, but current analysis methods face reproducibility and transferability issues due to complex pre-processing and task-specific models. We introduce NeuroSTORM (Neuroimaging Foundation Model with Spatial-Temporal Optimized Representation Modeling), a generalizable framework that directly learns from 4D fMRI volumes and enables efficient knowledge transfer across diverse applications. NeuroSTORM is pre-trained on 28.65 million fMRI frames (>9,000 hours) from over 50,000 subjects across multiple centers and ages 5 to 100. Using a Mamba backbone and a shifted scanning strategy, it efficiently processes full 4D volumes. We also propose a spatial-temporal optimized pre-training approach and task-specific prompt tuning to improve transferability. NeuroSTORM outperforms existing methods across five tasks: age/gender prediction, phenotype prediction, disease diagnosis, fMRI-to-image retrieval, and task-based fMRI classification. It demonstrates strong clinical utility on datasets from hospitals in the U.S., South Korea, and Australia, achieving top performance in disease diagnosis and cognitive phenotype prediction. NeuroSTORM provides a standardized, open-source foundation model to improve reproducibility and transferability in fMRI-based clinical research.

Yu Jiang, Xindi Tong, Ziyao Liu et al.

Federated unlearning has become an attractive approach to address privacy concerns in collaborative machine learning, for situations when sensitive data is remembered by AI models during the machine learning process. It enables the removal of specific data influences from trained models, aligning with the growing emphasis on the "right to be forgotten." While extensively studied in horizontal federated learning, unlearning in vertical federated learning (VFL) remains challenging due to the distributed feature architecture. VFL unlearning includes sample unlearning that removes specific data points' influence and label unlearning that removes entire classes. Since different parties hold complementary features of the same samples, unlearning tasks require cross-party coordination, creating computational overhead and complexities from feature interdependencies. To address such challenges, we propose FedORA (Federated Optimization for data Removal via primal-dual Algorithm), designed for sample and label unlearning in VFL. FedORA formulates the removal of certain samples or labels as a constrained optimization problem solved using a primal-dual framework. Our approach introduces a new unlearning loss function that promotes classification uncertainty rather than misclassification. An adaptive step size enhances stability, while an asymmetric batch design, considering the prior influence of the remaining data on the model, handles unlearning and retained data differently to efficiently reduce computational costs. We provide theoretical analysis proving that the model difference between FedORA and Train-from-scratch is bounded, establishing guarantees for unlearning effectiveness. Experiments on tabular and image datasets demonstrate that FedORA achieves unlearning effectiveness and utility preservation comparable to Train-from-scratch with reduced computation and communication overhead.

Hongtao Wu, Boyun Zheng, Dingjie Song et al.

Autonomous systems that generate scientific hypotheses, conduct experiments, and draft manuscripts have recently emerged as a promising paradigm for accelerating discovery. However, existing AI Scientists remain largely domain-agnostic, limiting their applicability to clinical medicine, where research is required to be grounded in medical evidence with specialized data modalities. In this work, we introduce Medical AI Scientist, the first autonomous research framework tailored to clinical autonomous research. It enables clinically grounded ideation by transforming extensively surveyed literature into actionable evidence through clinician-engineer co-reasoning mechanism, which improves the traceability of generated research ideas. It further facilitates evidence-grounded manuscript drafting guided by structured medical compositional conventions and ethical policies. The framework operates under 3 research modes, namely paper-based reproduction, literature-inspired innovation, and task-driven exploration, each corresponding to a distinct level of automated scientific inquiry with progressively increasing autonomy. Comprehensive evaluations by both large language models and human experts demonstrate that the ideas generated by the Medical AI Scientist are of substantially higher quality than those produced by commercial LLMs across 171 cases, 19 clinical tasks, and 6 data modalities. Meanwhile, our system achieves strong alignment between the proposed method and its implementation, while also demonstrating significantly higher success rates in executable experiments. Double-blind evaluations by human experts and the Stanford Agentic Reviewer suggest that the generated manuscripts approach MICCAI-level quality, while consistently surpassing those from ISBI and BIBM. The proposed Medical AI Scientist highlights the potential of leveraging AI for autonomous scientific discovery in healthcare.

Haoyu Wang, Chunyu Qiang, Tianrui Wang et al.

Recent advancements in speech synthesis models, trained on extensive datasets, have demonstrated remarkable zero-shot capabilities. These models can control content, timbre, and emotion in generated speech based on prompt inputs. Despite these advancements, the choice of prompts significantly impacts the output quality, yet most existing selection schemes do not adequately address the control of emotional intensity. To address this question, this paper proposes a two-stage prompt selection strategy EmoPro, which is specifically designed for emotionally controllable speech synthesis. This strategy focuses on selecting highly expressive and high-quality prompts by evaluating them from four perspectives: emotional expression strength, speech quality, text-emotion consistency, and model generation performance. Experimental results show that prompts selected using the proposed method result in more emotionally expressive and engaging synthesized speech compared to those obtained through baseline. Audio samples and codes will be available at https://whyrrrrun.github.io/EmoPro/.

Qifang Zhao, Tianyu Li, Meng Du et al.

When doing private domain marketing with cloud services, the merchants usually have to purchase different machine learning models for the multiple marketing purposes, leading to a very high cost. We present a unified user-item matching framework to simultaneously conduct item recommendation and user targeting with just one model. We empirically demonstrate that the above concurrent modeling is viable via modeling the user-item interaction matrix with the multinomial distribution, and propose a bidirectional bias-corrected NCE loss for the implementation. The proposed loss function guides the model to learn the user-item joint probability $p(u,i)$ instead of the conditional probability $p(i|u)$ or $p(u|i)$ through correcting both the users and items' biases caused by the in-batch negative sampling. In addition, our framework is model-agnostic enabling a flexible adaptation of different model architectures. Extensive experiments demonstrate that our framework results in significant performance gains in comparison with the state-of-the-art methods, with greatly reduced cost on computing resources and daily maintenance.

Yongji Zhang, Siqi Li, Kuiyang Huang et al.

Fine-Grained Visual Classification (FGVC) remains a challenging task due to subtle inter-class differences and large intra-class variations. Existing approaches typically rely on feature-selection mechanisms or region-proposal strategies to localize discriminative regions for semantic analysis. However, these methods often fail to capture discriminative cues comprehensively while introducing substantial category-agnostic redundancy. To address these limitations, we propose H3Former, a novel token-to-region framework that leverages high-order semantic relations to aggregate local fine-grained representations with structured region-level modeling. Specifically, we propose the Semantic-Aware Aggregation Module (SAAM), which exploits multi-scale contextual cues to dynamically construct a weighted hypergraph among tokens. By applying hypergraph convolution, SAAM captures high-order semantic dependencies and progressively aggregates token features into compact region-level representations. Furthermore, we introduce the Hyperbolic Hierarchical Contrastive Loss (HHCL), which enforces hierarchical semantic constraints in a non-Euclidean embedding space. The HHCL enhances inter-class separability and intra-class consistency while preserving the intrinsic hierarchical relationships among fine-grained categories. Comprehensive experiments conducted on four standard FGVC benchmarks validate the superiority of our H3Former framework.

Yongji Zhang, Siqi Li, Yue Gao et al.

Action Quality Assessment (AQA) aims to evaluate and score sports actions, which has attracted widespread interest in recent years. Existing AQA methods primarily predict scores based on features extracted from the entire video, resulting in limited interpretability and reliability. Meanwhile, existing AQA datasets also lack fine-grained annotations for action scores, especially for deduction items and sub-score annotations. In this paper, we construct the first AQA dataset containing fine-grained sub-score and deduction annotations for aerial skiing, which will be released as a new benchmark. For the technical challenges, we propose a novel AQA method, named JudgeMind, which significantly enhances performance and reliability by simulating the judgment and scoring mindset of professional referees. Our method segments the input action video into different stages and scores each stage to enhance accuracy. Then, we propose a stage-aware feature enhancement and fusion module to boost the perception of stage-specific key regions and enhance the robustness to visual changes caused by frequent camera viewpoints switching. In addition, we propose a knowledge-based grade-aware decoder to incorporate possible deduction items as prior knowledge to predict more accurate and reliable scores. Experimental results demonstrate that our method achieves state-of-the-art performance.

Xuanchen Li, Yuheng Lu, Chenrui Cui et al.

Audio and vision provide complementary evidence for audio-visual question answering, yet current audio-visual large language models may suffer from cross-modal interference: information from one modality misguides the interpretation of another, thereby inducing hallucinations. We attribute this issue to uncontrolled cross-modal interactions during intermediate reasoning. To mitigate this, we propose Separate First, Fuse Later (SFFL), an audio-visual reasoning framework designed to reduce cross-modal interference. SFFL enforces modality-specific chain-of-thought reasoning, producing separate audio and visual reasoning traces and integrating evidence for answering. We construct modality-preference labels via a data pipeline under different modality input settings. We use these labels as an auxiliary reward in reinforcement learning to encourage a instance-dependent preference for modality cues when answering. We further introduce a modality-specific reasoning mechanism that preserves modality isolation during the separated reasoning stage while enabling full access to cross-modal information at the evidence fusion stage. Experiments demonstrate consistent improvements in both accuracy and robustness, yielding an average relative gain of 5.16\% on general AVQA benchmarks and 11.17\% on a cross-modal hallucination benchmark.

Maolin Wang, Dongze Wu, Jianing Zhou et al.

Large language models (LLMs) have become an important semantic infrastructure for modern recommender systems. A prevailing paradigm integrates LLM-derived semantic embeddings with collaborative representations via representation alignment, implicitly assuming that the two views encode a shared latent entity and that stronger alignment yields better results. We formalize this assumption as the global low-complexity alignment hypothesis and argue that it is stronger than necessary and often structurally mismatched with real-world recommendation settings. We propose a complementary perspective in which semantic and collaborative representations are treated as partially shared yet fundamentally heterogeneous views, each containing both shared and view-specific factors. Under this shared-plus-private latent structure, enforcing global geometric alignment may distort local structure, suppress view-specific signals, and reduce informational diversity. To support this perspective, we develop complementarity-aware diagnostics that quantify overlap, unique-hit contribution, and theoretical fusion upper bounds. Empirical analyses on sparse recommendation benchmarks reveal low item-level agreement between semantic and collaborative views and substantial oracle fusion gains, indicating strong complementarity. Furthermore, controlled alignment probes show that low-capacity mappings capture only shared components and fail to recover full collaborative geometry, especially under distribution shift. These findings suggest that alignment should not be treated as the default integration principle. We advocate a shift from alignment-centric modeling to complementarity fusion-centric, complementarity-aware design, where shared factors are selectively integrated while private signals are preserved. This reframing provides a principled foundation for the next generation of LLM-enhanced recommender systems.

Gwihwan Go, Quan Zhang, Chijin Zhou et al.

Automated unit test generation is essential for robust software development, yet existing approaches struggle to generalize across multiple programming languages and operate within real-time development. While Large Language Models (LLMs) offer a promising solution, their ability to generate high coverage test code depends on prompting a concise context of the focal method. Current solutions, such as Retrieval-Augmented Generation, either rely on imprecise similarity-based searches or demand the creation of costly, language-specific static analysis pipelines. To address this gap, we present LSPRAG, a framework for concise-context retrieval tailored for real-time, language-agnostic unit test generation. LSPRAG leverages off-the-shelf Language Server Protocol (LSP) back-ends to supply LLMs with precise symbol definitions and references in real time. By reusing mature LSP servers, LSPRAG provides an LLM with language-aware context retrieval, requiring minimal per-language engineering effort. We evaluated LSPRAG on open-source projects spanning Java, Go, and Python. Compared to the best performance of baselines, LSPRAG increased line coverage by up to 174.55% for Golang, 213.31% for Java, and 31.57% for Python.

Ruiming Du, Guangxun Zhai, Tian Qiu et al.

The precise characterization of plant morphology provides valuable insights into plant environment interactions and genetic evolution. A key technology for extracting this information is 3D segmentation, which delineates individual plant organs from complex point clouds. Despite significant progress in general 3D computer vision domains, the adoption of 3D segmentation for plant phenotyping remains limited by three major challenges: i) the scarcity of large-scale annotated datasets, ii) technical difficulties in adapting advanced deep neural networks to plant point clouds, and iii) the lack of standardized benchmarks and evaluation protocols tailored to plant science. This review systematically addresses these barriers by: i) providing an overview of existing 3D plant datasets in the context of general 3D segmentation domains, ii) systematically summarizing deep learning-based methods for point cloud semantic and instance segmentation, iii) introducing Plant Segmentation Studio (PSS), an open-source framework for reproducible benchmarking, and iv) conducting extensive quantitative experiments to evaluate representative networks and sim-to-real learning strategies. Our findings highlight the efficacy of sparse convolutional backbones and transformer-based instance segmentation, while also emphasizing the complementary role of modeling-based and augmentation-based synthetic data generation for sim-to-real learning in reducing annotation demands. In general, this study bridges the gap between algorithmic advances and practical deployment, providing immediate tools for researchers and a roadmap for developing data-efficient and generalizable deep learning solutions in 3D plant phenotyping. Data and code are available at https://github.com/perrydoremi/PlantSegStudio.

Mingrui Zhang, Jianzhong Liu, Fuchen Ma et al.

Fuzzing is a technique widely used in vulnerability detection. The process usually involves writing effective fuzz driver programs, which, when done manually, can be extremely labor intensive. Previous attempts at automation leave much to be desired, in either degree of automation or quality of output. In this paper, we propose IntelliGen, a framework that constructs valid fuzz drivers automatically. First, IntelliGen determines a set of entry functions and evaluates their respective chance of exhibiting a vulnerability. Then, IntelliGen generates fuzz drivers for the entry functions through hierarchical parameter replacement and type inference. We implemented IntelliGen and evaluated its effectiveness on real-world programs selected from the Android Open-Source Project, Google's fuzzer-test-suite and industrial collaborators. IntelliGen covered on average 1.08X-2.03X more basic blocks and 1.36X-2.06X more paths over state-of-the-art fuzz driver synthesizers FUDGE and FuzzGen. IntelliGen performed on par with manually written drivers and found 10 more bugs.

Yu Jiang, Vivek Natarajan, Xinlei Chen et al.

This document describes Pythia v0.1, the winning entry from Facebook AI Research (FAIR)'s A-STAR team to the VQA Challenge 2018. Our starting point is a modular re-implementation of the bottom-up top-down (up-down) model. We demonstrate that by making subtle but important changes to the model architecture and the learning rate schedule, fine-tuning image features, and adding data augmentation, we can significantly improve the performance of the up-down model on VQA v2.0 dataset -- from 65.67% to 70.22%. Furthermore, by using a diverse ensemble of models trained with different features and on different datasets, we are able to significantly improve over the 'standard' way of ensembling (i.e. same model with different random seeds) by 1.31%. Overall, we achieve 72.27% on the test-std split of the VQA v2.0 dataset. Our code in its entirety (training, evaluation, data-augmentation, ensembling) and pre-trained models are publicly available at: https://github.com/facebookresearch/pythia

Yuanliang Chen, Yu Jiang, Fuchen Ma et al.

Fuzzing is widely used for software vulnerability detection. There are various kinds of fuzzers with different fuzzing strategies, and most of them perform well on their targets. However, in industry practice and empirical study, the performance and generalization ability of those well-designed fuzzing strategies are challenged by the complexity and diversity of real-world applications. In this paper, inspired by the idea of ensemble learning, we first propose an ensemble fuzzing approach EnFuzz, that integrates multiple fuzzing strategies to obtain better performance and generalization ability than that of any constituent fuzzer alone. First, we define the diversity of the base fuzzers and choose those most recent and well-designed fuzzers as base fuzzers. Then, EnFuzz ensembles those base fuzzers with seed synchronization and result integration mechanisms. For evaluation, we implement EnFuzz , a prototype basing on four strong open-source fuzzers (AFL, AFLFast, AFLGo, FairFuzz), and test them on Google's fuzzing test suite, which consists of widely used real-world applications. The 24-hour experiment indicates that, with the same resources usage, these four base fuzzers perform variously on different applications, while EnFuzz shows better generalization ability and always outperforms others in terms of path coverage, branch coverage and crash discovery. Even compared with the best cases of AFL, AFLFast, AFLGo and FairFuzz, EnFuzz discovers 26.8%, 117%, 38.8% and 39.5% more unique crashes, executes 9.16%, 39.2%, 19.9% and 20.0% more paths and covers 5.96%, 12.0%, 21.4% and 11.1% more branches respectively.

Quan Zhang, Binqi Zeng, Chijin Zhou et al.

Presently, with the assistance of advanced LLM application development frameworks, more and more LLM-powered applications can effortlessly augment the LLMs' knowledge with external content using the retrieval augmented generation (RAG) technique. However, these frameworks' designs do not have sufficient consideration of the risk of external content, thereby allowing attackers to undermine the applications developed with these frameworks. In this paper, we reveal a new threat to LLM-powered applications, termed retrieval poisoning, where attackers can guide the application to yield malicious responses during the RAG process. Specifically, through the analysis of LLM application frameworks, attackers can craft documents visually indistinguishable from benign ones. Despite the documents providing correct information, once they are used as reference sources for RAG, the application is misled into generating incorrect responses. Our preliminary experiments indicate that attackers can mislead LLMs with an 88.33\% success rate, and achieve a 66.67\% success rate in the real-world application, demonstrating the potential impact of retrieval poisoning.

Yu Jiang, Jie Liang, Fuchen Ma et al.

Fuzzing, a widely-used technique for bug detection, has seen advancements through Large Language Models (LLMs). Despite their potential, LLMs face specific challenges in fuzzing. In this paper, we identified five major challenges of LLM-assisted fuzzing. To support our findings, we revisited the most recent papers from top-tier conferences, confirming that these challenges are widespread. As a remedy, we propose some actionable recommendations to help improve applying LLM in Fuzzing and conduct preliminary evaluations on DBMS fuzzing. The results demonstrate that our recommendations effectively address the identified challenges.

Yu Jiang, Xindi Tong, Ziyao Liu et al.

Federated unlearning (FU) offers a promising solution to effectively address the need to erase the impact of specific clients' data on the global model in federated learning (FL), thereby granting individuals the ``Right to be Forgotten". The most straightforward approach to achieve unlearning is to train the model from scratch, excluding clients who request data removal, but it is resource-intensive. Current state-of-the-art FU methods extend traditional FL frameworks by leveraging stored historical updates, enabling more efficient unlearning than training from scratch. However, the use of stored updates introduces significant privacy risks. Adversaries with access to these updates can potentially reconstruct clients' local data, a well-known vulnerability in the privacy domain. While privacy-enhanced techniques exist, their applications to FU scenarios that balance unlearning efficiency with privacy protection remain underexplored. To address this gap, we propose FedADP, a method designed to achieve both efficiency and privacy preservation in FU. Our approach incorporates an adaptive differential privacy (DP) mechanism, carefully balancing privacy and unlearning performance through a novel budget allocation strategy tailored for FU. FedADP also employs a dual-layered selection process, focusing on global models with significant changes and client updates closely aligned with the global model, reducing storage and communication costs. Additionally, a novel calibration method is introduced to facilitate effective unlearning. Extensive experimental results demonstrate that FedADP effectively manages the trade-off between unlearning efficiency and privacy protection.

Jinjing Shi, Zimeng Xiao, Heyuan Shi et al.

Quantum Neural Network (QNN) combines the Deep Learning (DL) principle with the fundamental theory of quantum mechanics to achieve machine learning tasks with quantum acceleration. Recently, QNN systems have been found to manifest robustness issues similar to classical DL systems. There is an urgent need for ways to test their correctness and security. However, QNN systems differ significantly from traditional quantum software and classical DL systems, posing critical challenges for QNN testing. These challenges include the inapplicability of traditional quantum software testing methods to QNN systems due to differences in programming paradigms and decision logic representations, the dependence of quantum test sample generation on perturbation operators, and the absence of effective information in quantum neurons. In this paper, we propose QuanTest, a quantum entanglement-guided adversarial testing framework to uncover potential erroneous behaviors in QNN systems. We design a quantum entanglement adequacy criterion to quantify the entanglement acquired by the input quantum states from the QNN system, along with two similarity metrics to measure the proximity of generated quantum adversarial examples to the original inputs. Subsequently, QuanTest formulates the problem of generating test inputs that maximize the quantum entanglement adequacy and capture incorrect behaviors of the QNN system as a joint optimization problem and solves it in a gradient-based manner to generate quantum adversarial examples. results demonstrate that QuanTest possesses the capability to capture erroneous behaviors in QNN systems. The entanglement-guided approach proves effective in adversarial testing, generating more adversarial examples.

Xuejian Guo, Zhiqiang Tian, Yuehang Wang et al.

Low-light image enhancement aims to restore the under-exposure image captured in dark scenarios. Under such scenarios, traditional frame-based cameras may fail to capture the structure and color information due to the exposure time limitation. Event cameras are bio-inspired vision sensors that respond to pixel-wise brightness changes asynchronously. Event cameras' high dynamic range is pivotal for visual perception in extreme low-light scenarios, surpassing traditional cameras and enabling applications in challenging dark environments. In this paper, inspired by the success of the retinex theory for traditional frame-based low-light image restoration, we introduce the first methods that combine the retinex theory with event cameras and propose a novel retinex-based low-light image restoration framework named ERetinex. Among our contributions, the first is developing a new approach that leverages the high temporal resolution data from event cameras with traditional image information to estimate scene illumination accurately. This method outperforms traditional image-only techniques, especially in low-light environments, by providing more precise lighting information. Additionally, we propose an effective fusion strategy that combines the high dynamic range data from event cameras with the color information of traditional images to enhance image quality. Through this fusion, we can generate clearer and more detail-rich images, maintaining the integrity of visual information even under extreme lighting conditions. The experimental results indicate that our proposed method outperforms state-of-the-art (SOTA) methods, achieving a gain of 1.0613 dB in PSNR while reducing FLOPS by \textbf{84.28}\%.

Yu Jiang, Chee Wei Tan, Kwok-Yan Lam

Federated learning facilitates collaborative machine learning, enabling multiple participants to collectively develop a shared model while preserving the privacy of individual data. The growing importance of the "right to be forgotten" calls for effective mechanisms to facilitate data removal upon request. In response, federated unlearning (FU) has been developed to efficiently eliminate the influence of specific data from the model. Current FU methods primarily rely on approximate unlearning strategies, which seek to balance data removal efficacy with computational and communication costs, but often fail to completely erase data influence. To address these limitations, we propose FedUHB, a novel exact unlearning approach that leverages the Polyak heavy ball optimization technique, a first-order method, to achieve rapid retraining. In addition, we introduce a dynamic stopping mechanism to optimize the termination of the unlearning process. Our extensive experiments show that FedUHB not only enhances unlearning efficiency but also preserves robust model performance after unlearning. Furthermore, the dynamic stopping mechanism effectively reduces the number of unlearning iterations, conserving both computational and communication resources. FedUHB can be proved as an effective and efficient solution for exact data removal in federated learning settings.

Sudarshan Srinivasa Ramanujam, Akanksha Bindal, Yu Jiang et al.

A post embedding (representation of text in embedding space that effectively captures semantic meaning) is a foundational component of LinkedIn that is consumed by product surfaces in retrieval and ranking (e.g., ranking posts in the feed or video tab). This paper presents the post embeddings used at LinkedIn, where a pre-trained transformer-based large language model (LLM) is taken as input and fine-tuned using multi-task learning across a diverse set of semantic labeling tasks. We observe positive transfer, leading to improved performance across all tasks, compared to training them independently. The generated post embeddings outperform baseline models in zero-shot learning, demonstrating its potential for broader applicability. Furthermore, the generated post embeddings' performance surpasses that of OpenAI's ADA-001 and ADA-002 embeddings on LinkedIn specific datasets and tasks. We also describe the offline evaluation methodology and the deployment to our near-line infrastructure, which makes the post embedding available for use within minutes of post creation for any downstream application. We present how the embeddings were applied in the Feed product surface, in both ranking and retrieval stages, and showcase the real world online impact to demonstrate the superior performance of these embeddings. Finally, we also share the results of applying the embeddings to the retrieval system of our video ranking product surface in LinkedIn. These embeddings have been battle-tested in production at LinkedIn for over two years, consistently powering multiple products.

Tao Liu, Tianyu Zhang, Yongxue Chen et al.

We propose a neural network-based computational framework for the simultaneous optimization of structural topology, curved layers, and path orientations to achieve strong anisotropic strength in fiber-reinforced thermoplastic composites while ensuring manufacturability. Our framework employs three implicit neural fields to represent geometric shape, layer sequence, and fiber orientation. This enables the direct formulation of both design and manufacturability objectives - such as anisotropic strength, structural volume, machine motion control, layer curvature, and layer thickness - into an integrated and differentiable optimization process. By incorporating these objectives as loss functions, the framework ensures that the resultant composites exhibit optimized mechanical strength while remaining its manufacturability for filament-based multi-axis 3D printing across diverse hardware platforms. Physical experiments demonstrate that the composites generated by our co-optimization method can achieve an improvement of up to 33.1% in failure loads compared to composites with sequentially optimized structures and manufacturing sequences.

Tian Qiu, Ruiming Du, Nikolai Spine et al.

Modern orchards are planted in structured rows with distinct panel divisions to improve management. Accurate and efficient joint segmentation of point cloud from Panel to Tree and Branch (P2TB) is essential for robotic operations. However, most current segmentation methods focus on single instance segmentation and depend on a sequence of deep networks to perform joint tasks. This strategy hinders the use of hierarchical information embedded in the data, leading to both error accumulation and increased costs for annotation and computation, which limits its scalability for real-world applications. In this study, we proposed a novel approach that incorporated a Real2Sim L-TreeGen for training data generation and a joint model (J-P2TB) designed for the P2TB task. The J-P2TB model, trained on the generated simulation dataset, was used for joint segmentation of real-world panel point clouds via zero-shot learning. Compared to representative methods, our model outperformed them in most segmentation metrics while using 40% fewer learnable parameters. This Sim2Real result highlighted the efficacy of L-TreeGen in model training and the performance of J-P2TB for joint segmentation, demonstrating its strong accuracy, efficiency, and generalizability for real-world applications. These improvements would not only greatly benefit the development of robots for automated orchard operations but also advance digital twin technology.

Tian Qiu, Alan Zoubi, Yiyuan Lin et al.

Digital twin applications offered transformative potential by enabling real-time monitoring and robotic simulation through accurate virtual replicas of physical assets. The key to these systems is 3D reconstruction with high geometrical fidelity. However, existing methods struggled under field conditions, especially with sparse and occluded views. This study developed a two-stage framework (DATR) for the reconstruction of apple trees from sparse views. The first stage leverages onboard sensors and foundation models to semi-automatically generate tree masks from complex field images. Tree masks are used to filter out background information in multi-modal data for the single-image-to-3D reconstruction at the second stage. This stage consists of a diffusion model and a large reconstruction model for respective multi view and implicit neural field generation. The training of the diffusion model and LRM was achieved by using realistic synthetic apple trees generated by a Real2Sim data generator. The framework was evaluated on both field and synthetic datasets. The field dataset includes six apple trees with field-measured ground truth, while the synthetic dataset featured structurally diverse trees. Evaluation results showed that our DATR framework outperformed existing 3D reconstruction methods across both datasets and achieved domain-trait estimation comparable to industrial-grade stationary laser scanners while improving the throughput by $\sim$360 times, demonstrating strong potential for scalable agricultural digital twin systems.

Daoyuan Jin, Nick Gunner, Niko Carvajal Janke et al.

Modern plant science increasingly relies on large, heterogeneous datasets, but challenges in experimental design, data preprocessing, and reproducibility hinder research throughput. Here we introduce Aleks, an AI-powered multi-agent system that integrates domain knowledge, data analysis, and machine learning within a structured framework to autonomously conduct data-driven scientific discovery. Once provided with a research question and dataset, Aleks iteratively formulated problems, explored alternative modeling strategies, and refined solutions across multiple cycles without human intervention. In a case study on grapevine red blotch disease, Aleks progressively identified biologically meaningful features and converged on interpretable models with robust performance. Ablation studies underscored the importance of domain knowledge and memory for coherent outcomes. This exploratory work highlights the promise of agentic AI as an autonomous collaborator for accelerating scientific discovery in plant sciences.

Yu Jiang, Jiahao Xia, Jiongming Qin et al.

Full-body Human inverse rendering based on physically-based rendering aims to acquire high-quality materials, which helps achieve photo-realistic rendering under arbitrary illuminations. This task requires estimating multiple material maps and usually relies on the constraint of rendering result. The absence of constraints on the material maps makes inverse rendering an ill-posed task. Previous works alleviated this problem by building material dataset for training, but their simplified material data and rendering equation lead to rendering results with limited realism, especially that of skin. To further alleviate this problem, we construct a higher-quality dataset (OpenHumanBRDF) based on scanned real data and statistical material data. In addition to the normal, diffuse albedo, roughness, specular albedo, we produce displacement and subsurface scattering to enhance the realism of rendering results, especially for the skin. With the increase in prediction tasks for more materials, using an end-to-end model as in the previous work struggles to balance the importance among various material maps, and leads to model underfitting. Therefore, we design a model (HumanMaterial) with progressive training strategy to make full use of the supervision information of the material maps and improve the performance of material estimation. HumanMaterial first obtain the initial material results via three prior models, and then refine the results by a finetuning model. Prior models estimate different material maps, and each map has different significance for rendering results. Thus, we design a Controlled PBR Rendering (CPR) loss, which enhances the importance of the materials to be optimized during the training of prior models. Extensive experiments on OpenHumanBRDF dataset and real data demonstrate that our method achieves state-of-the-art performance.

Xin Yang, Ruiming Du, Hanyang Huang et al.

Organ segmentation of plant point clouds is a prerequisite for the high-resolution and accurate extraction of organ-level phenotypic traits. Although the fast development of deep learning has boosted much research on segmentation of plant point clouds, the existing techniques for organ segmentation still face limitations in resolution, segmentation accuracy, and generalizability across various plant species. In this study, we proposed a novel approach called plant segmentation neural radiance fields (PlantSegNeRF), aiming to directly generate high-precision instance point clouds from multi-view RGB image sequences for a wide range of plant species. PlantSegNeRF performed 2D instance segmentation on the multi-view images to generate instance masks for each organ with a corresponding ID. The multi-view instance IDs corresponding to the same plant organ were then matched and refined using a specially designed instance matching module. The instance NeRF was developed to render an implicit scene, containing color, density, semantic and instance information. The implicit scene was ultimately converted into high-precision plant instance point clouds based on the volume density. The results proved that in semantic segmentation of point clouds, PlantSegNeRF outperformed the commonly used methods, demonstrating an average improvement of 16.1%, 18.3%, 17.8%, and 24.2% in precision, recall, F1-score, and IoU compared to the second-best results on structurally complex species. More importantly, PlantSegNeRF exhibited significant advantages in plant point cloud instance segmentation tasks. Across all plant species, it achieved average improvements of 11.7%, 38.2%, 32.2% and 25.3% in mPrec, mRec, mCov, mWCov, respectively. This study extends the organ-level plant phenotyping and provides a high-throughput way to supply high-quality 3D data for the development of large-scale models in plant science.

Mingquan Feng, Yifan Fu, Tongcheng Zhang et al.

Despite the widely recognized success of residual connections in modern neural networks, their design principles remain largely heuristic. This paper introduces KITINet (Kinetics Theory Inspired Network), a novel architecture that reinterprets feature propagation through the lens of non-equilibrium particle dynamics and partial differential equation (PDE) simulation. At its core, we propose a residual module that models feature updates as the stochastic evolution of a particle system, numerically simulated via a discretized solver for the Boltzmann transport equation (BTE). This formulation mimics particle collisions and energy exchange, enabling adaptive feature refinement via physics-informed interactions. Additionally, we reveal that this mechanism induces network parameter condensation during training, where parameters progressively concentrate into a sparse subset of dominant channels. Experiments on scientific computation (PDE operator), image classification (CIFAR-10/100), and text classification (IMDb/SNLI) show consistent improvements over classic network baselines, with negligible increase of FLOPs.