J. Wang

AI
5papers
247citations
Novelty48%
AI Score25

5 Papers

NADec 6, 2016
Finite element method for nonlinear Riesz space fractional diffusion equations on irregular domains

Z. Yang, Z. Yuan, Y. Nie et al.

In this paper, we consider two-dimensional Riesz space fractional diffusion equations with nonlinear source term on convex domains. Applying Galerkin finite element method in space and backward difference method in time, we present a fully discrete scheme to solve Riesz space fractional diffusion equations. Our breakthrough is developing an algorithm to form stiffness matrix on unstructured triangular meshes, which can help us to deal with space fractional terms on any convex domain. The stability and convergence of the scheme are also discussed. Numerical examples are given to verify accuracy and stability of our scheme.

LGJul 6, 2021
DeepDDS: deep graph neural network with attention mechanism to predict synergistic drug combinations

J. Wang, X. Liu, S. Shen et al.

Drug combination therapy has become a increasingly promising method in the treatment of cancer. However, the number of possible drug combinations is so huge that it is hard to screen synergistic drug combinations through wet-lab experiments. Therefore, computational screening has become an important way to prioritize drug combinations. Graph neural network have recently shown remarkable performance in the prediction of compound-protein interactions, but it has not been applied to the screening of drug combinations. In this paper, we proposed a deep learning model based on graph neural networks and attention mechanism to identify drug combinations that can effectively inhibit the viability of specific cancer cells. The feature embeddings of drug molecule structure and gene expression profiles were taken as input to multi-layer feedforward neural network to identify the synergistic drug combinations. We compared DeepDDS with classical machine learning methods and other deep learning-based methods on benchmark data set, and the leave-one-out experimental results showed that DeepDDS achieved better performance than competitive methods. Also, on an independent test set released by well-known pharmaceutical enterprise AstraZeneca, DeepDDS was superior to competitive methods by more than 16\% predictive precision. Furthermore, we explored the interpretability of the graph attention network, and found the correlation matrix of atomic features revealed important chemical substructures of drugs. We believed that DeepDDS is an effective tool that prioritized synergistic drug combinations for further wet-lab experiment validation.

HCNov 4, 2020
Impact of delayed response on Wearable Cognitive Assistance

M. Olguín Muñoz, R. Klatzky, J. Wang et al.

Wearable Cognitive Assistants (WCA) are anticipated to become a widely-used application class, in conjunction with emerging network infrastructures like 5G that incorporate edge computing capabilities. While prototypical studies of such applications exist today, the relationship between infrastructure service provisioning and its implication for WCA usability is largely unexplored despite the relevance that these applications have for future networks. This paper presents an experimental study assessing how WCA users react to varying end-to-end delays induced by the application pipeline or infrastructure. Participants interacted directly with an instrumented task-guidance WCA as delays were introduced into the system in a controllable fashion. System and task state were tracked in real time, and biometric data from wearable sensors on the participants were recorded. Our results show that periods of extended system delay cause users to correspondingly (and substantially) slow down in their guided task execution, an effect that persists for a time after the system returns to a more responsive state. Furthermore, the slow-down in task execution is correlated with a personality trait, neuroticism, associated with intolerance for time delays. We show that our results implicate impaired cognitive planning, as contrasted with resource depletion or emotional arousal, as the reason for slowed user task executions under system delay. The findings have several implications for the design and operation of WCA applications as well as computational and communication infrastructure, and additionally for the development of performance analysis tools for WCA.

MLJun 5, 2020
The Expected Jacobian Outerproduct: Theory and Empirics

Shubhendu Trivedi, J. Wang

The expected gradient outerproduct (EGOP) of an unknown regression function is an operator that arises in the theory of multi-index regression, and is known to recover those directions that are most relevant to predicting the output. However, work on the EGOP, including that on its cheap estimators, is restricted to the regression setting. In this work, we adapt this operator to the multi-class setting, which we dub the expected Jacobian outerproduct (EJOP). Moreover, we propose a simple rough estimator of the EJOP and show that somewhat surprisingly, it remains statistically consistent under mild assumptions. Furthermore, we show that the eigenvalues and eigenspaces also remain consistent. Finally, we show that the estimated EJOP can be used as a metric to yield improvements in real-world non-parametric classification tasks: both by its use as a metric, and also as cheap initialization in metric learning tasks.

AIJul 12, 2019
A semi-holographic hyperdimensional representation system for hardware-friendly cognitive computing

A. Serb, I. Kobyzev, J. Wang et al.

One of the main, long-term objectives of artificial intelligence is the creation of thinking machines. To that end, substantial effort has been placed into designing cognitive systems; i.e. systems that can manipulate semantic-level information. A substantial part of that effort is oriented towards designing the mathematical machinery underlying cognition in a way that is very efficiently implementable in hardware. In this work we propose a 'semi-holographic' representation system that can be implemented in hardware using only multiplexing and addition operations, thus avoiding the need for expensive multiplication. The resulting architecture can be readily constructed by recycling standard microprocessor elements and is capable of performing two key mathematical operations frequently used in cognition, superposition and binding, within a budget of below 6 pJ for 64- bit operands. Our proposed 'cognitive processing unit' (CoPU) is intended as just one (albeit crucial) part of much larger cognitive systems where artificial neural networks of all kinds and associative memories work in concord to give rise to intelligence.