Co-training with High-Confidence Pseudo Labels for Semi-supervised Medical Image SegmentationZhiqiang Shen, Peng Cao, Hua Yang et al.
Consistency regularization and pseudo labeling-based semi-supervised methods perform co-training using the pseudo labels from multi-view inputs. However, such co-training models tend to converge early to a consensus, degenerating to the self-training ones, and produce low-confidence pseudo labels from the perturbed inputs during training. To address these issues, we propose an Uncertainty-guided Collaborative Mean-Teacher (UCMT) for semi-supervised semantic segmentation with the high-confidence pseudo labels. Concretely, UCMT consists of two main components: 1) collaborative mean-teacher (CMT) for encouraging model disagreement and performing co-training between the sub-networks, and 2) uncertainty-guided region mix (UMIX) for manipulating the input images according to the uncertainty maps of CMT and facilitating CMT to produce high-confidence pseudo labels. Combining the strengths of UMIX with CMT, UCMT can retain model disagreement and enhance the quality of pseudo labels for the co-training segmentation. Extensive experiments on four public medical image datasets including 2D and 3D modalities demonstrate the superiority of UCMT over the state-of-the-art. Code is available at: https://github.com/Senyh/UCMT.
On the Origin of Hallucinations in Conversational Models: Is it the Datasets or the Models?Nouha Dziri, Sivan Milton, Mo Yu et al. · ibm-research
Knowledge-grounded conversational models are known to suffer from producing factually invalid statements, a phenomenon commonly called hallucination. In this work, we investigate the underlying causes of this phenomenon: is hallucination due to the training data, or to the models? We conduct a comprehensive human study on both existing knowledge-grounded conversational benchmarks and several state-of-the-art models. Our study reveals that the standard benchmarks consist of >60% hallucinated responses, leading to models that not only hallucinate but even amplify hallucinations. Our findings raise important questions on the quality of existing datasets and models trained using them. We make our annotations publicly available for future research.
24.7CLApr 22, 2022
FaithDial: A Faithful Benchmark for Information-Seeking DialogueNouha Dziri, Ehsan Kamalloo, Sivan Milton et al.
The goal of information-seeking dialogue is to respond to seeker queries with natural language utterances that are grounded on knowledge sources. However, dialogue systems often produce unsupported utterances, a phenomenon known as hallucination. To mitigate this behavior, we adopt a data-centric solution and create FaithDial, a new benchmark for hallucination-free dialogues, by editing hallucinated responses in the Wizard of Wikipedia (WoW) benchmark. We observe that FaithDial is more faithful than WoW while also maintaining engaging conversations. We show that FaithDial can serve as training signal for: i) a hallucination critic, which discriminates whether an utterance is faithful or not, and boosts the performance by 12.8 F1 score on the BEGIN benchmark compared to existing datasets for dialogue coherence; ii) high-quality dialogue generation. We benchmark a series of state-of-the-art models and propose an auxiliary contrastive objective that achieves the highest level of faithfulness and abstractiveness based on several automated metrics. Further, we find that the benefits of FaithDial generalize to zero-shot transfer on other datasets, such as CMU-Dog and TopicalChat. Finally, human evaluation reveals that responses generated by models trained on FaithDial are perceived as more interpretable, cooperative, and engaging.
Self-Paced Sample Selection for Barely-Supervised Medical Image SegmentationJunming Su, Zhiqiang Shen, Peng Cao et al.
The existing barely-supervised medical image segmentation (BSS) methods, adopting a registration-segmentation paradigm, aim to learn from data with very few annotations to mitigate the extreme label scarcity problem. However, this paradigm poses a challenge: pseudo-labels generated by image registration come with significant noise. To address this issue, we propose a self-paced sample selection framework (SPSS) for BSS. Specifically, SPSS comprises two main components: 1) self-paced uncertainty sample selection (SU) for explicitly improving the quality of pseudo labels in the image space, and 2) self-paced bidirectional feature contrastive learning (SC) for implicitly improving the quality of pseudo labels through enhancing the separability between class semantics in the feature space. Both SU and SC are trained collaboratively in a self-paced learning manner, ensuring that SPSS can learn from high-quality pseudo labels for BSS. Extensive experiments on two public medical image segmentation datasets demonstrate the effectiveness and superiority of SPSS over the state-of-the-art. Our code is release at https://github.com/SuuuJM/SPSS.
0.3CLOct 28, 2022
Deep Temporal Modelling of Clinical Depression through Social Media TextNawshad Farruque, Randy Goebel, Sudhakar Sivapalan et al.
We describe the development of a model to detect user-level clinical depression based on a user's temporal social media posts. Our model uses a Depression Symptoms Detection (DSD) classifier, which is trained on the largest existing samples of clinician annotated tweets for clinical depression symptoms. We subsequently use our DSD model to extract clinically relevant features, e.g., depression scores and their consequent temporal patterns, as well as user posting activity patterns, e.g., quantifying their ``no activity'' or ``silence.'' Furthermore, to evaluate the efficacy of these extracted features, we create three kinds of datasets including a test dataset, from two existing well-known benchmark datasets for user-level depression detection. We then provide accuracy measures based on single features, baseline features and feature ablation tests, at several different levels of temporal granularity. The relevant data distributions and clinical depression detection related settings can be exploited to draw a complete picture of the impact of different features across our created datasets. Finally, we show that, in general, only semantic oriented representation models perform well. However, clinical features may enhance overall performance provided that the training and testing distribution is similar, and there is more data in a user's timeline. The consequence is that the predictive capability of depression scores increase significantly while used in a more sensitive clinical depression detection settings.
1.4CLSep 6, 2022
Depression Symptoms Modelling from Social Media Text: A Semi-supervised Learning ApproachNawshad Farruque, Randy Goebel, Sudhakar Sivapalan et al.
A fundamental component of user-level social media language based clinical depression modelling is depression symptoms detection (DSD). Unfortunately, there does not exist any DSD dataset that reflects both the clinical insights and the distribution of depression symptoms from the samples of self-disclosed depressed population. In our work, we describe a Semi-supervised Learning (SSL) framework which uses an initial supervised learning model that leverages 1) a state-of-the-art large mental health forum text pre-trained language model further fine-tuned on a clinician annotated DSD dataset, 2) a Zero-Shot learning model for DSD, and couples them together to harvest depression symptoms related samples from our large self-curated Depression Tweets Repository (DTR). Our clinician annotated dataset is the largest of its kind. Furthermore, DTR is created from the samples of tweets in self-disclosed depressed users Twitter timeline from two datasets, including one of the largest benchmark datasets for user-level depression detection from Twitter. This further helps preserve the depression symptoms distribution of self-disclosed Twitter users tweets. Subsequently, we iteratively retrain our initial DSD model with the harvested data. We discuss the stopping criteria and limitations of this SSL process, and elaborate the underlying constructs which play a vital role in the overall SSL process. We show that we can produce a final dataset which is the largest of its kind. Furthermore, a DSD and a Depression Post Detection (DPD) model trained on it achieves significantly better accuracy than their initial version.
5.3IVJan 17, 2023
Self-supervised Domain Adaptation for Breaking the Limits of Low-quality Fundus Image Quality EnhancementQingshan Hou, Peng Cao, Jiaqi Wang et al.
Retinal fundus images have been applied for the diagnosis and screening of eye diseases, such as Diabetic Retinopathy (DR) or Diabetic Macular Edema (DME). However, both low-quality fundus images and style inconsistency potentially increase uncertainty in the diagnosis of fundus disease and even lead to misdiagnosis by ophthalmologists. Most of the existing image enhancement methods mainly focus on improving the image quality by leveraging the guidance of high-quality images, which is difficult to be collected in medical applications. In this paper, we tackle image quality enhancement in a fully unsupervised setting, i.e., neither paired images nor high-quality images. To this end, we explore the potential of the self-supervised task for improving the quality of fundus images without the requirement of high-quality reference images. Specifically, we construct multiple patch-wise domains via an auxiliary pre-trained quality assessment network and a style clustering. To achieve robust low-quality image enhancement and address style inconsistency, we formulate two self-supervised domain adaptation tasks to disentangle the features of image content, low-quality factor and style information by exploring intrinsic supervision signals within the low-quality images. Extensive experiments are conducted on EyeQ and Messidor datasets, and results show that our DASQE method achieves new state-of-the-art performance when only low-quality images are available.
0.3CLApr 19, 2022
Named Entity Recognition for Partially Annotated DatasetsMichael Strobl, Amine Trabelsi, Osmar Zaiane
The most common Named Entity Recognizers are usually sequence taggers trained on fully annotated corpora, i.e. the class of all words for all entities is known. Partially annotated corpora, i.e. some but not all entities of some types are annotated, are too noisy for training sequence taggers since the same entity may be annotated one time with its true type but not another time, misleading the tagger. Therefore, we are comparing three training strategies for partially annotated datasets and an approach to derive new datasets for new classes of entities from Wikipedia without time-consuming manual data annotation. In order to properly verify that our data acquisition and training approaches are plausible, we manually annotated test datasets for two new classes, namely food and drugs.
FREDA: Flexible Relation Extraction Data AnnotationMichael Strobl, Amine Trabelsi, Osmar Zaiane
To effectively train accurate Relation Extraction models, sufficient and properly labeled data is required. Adequately labeled data is difficult to obtain and annotating such data is a tricky undertaking. Previous works have shown that either accuracy has to be sacrificed or the task is extremely time-consuming, if done accurately. We are proposing an approach in order to produce high-quality datasets for the task of Relation Extraction quickly. Neural models, trained to do Relation Extraction on the created datasets, achieve very good results and generalize well to other datasets. In our study, we were able to annotate 10,022 sentences for 19 relations in a reasonable amount of time, and trained a commonly used baseline model for each relation.
Exploring Best Practices for ECG Pre-Processing in Machine LearningAmir Salimi, Sunil Vasu Kalmady, Abram Hindle et al.
In this work we search for best practices in pre-processing of Electrocardiogram (ECG) signals in order to train better classifiers for the diagnosis of heart conditions. State of the art machine learning algorithms have achieved remarkable results in classification of some heart conditions using ECG data, yet there appears to be no consensus on pre-processing best practices. Is this lack of consensus due to different conditions and architectures requiring different processing steps for optimal performance? Is it possible that state of the art deep-learning models have rendered pre-processing unnecessary? In this work we apply down-sampling, normalization, and filtering functions to 3 different multi-label ECG datasets and measure their effects on 3 different high-performing time-series classifiers. We find that sampling rates as low as 50Hz can yield comparable results to the commonly used 500Hz. This is significant as smaller sampling rates will result in smaller datasets and models, which require less time and resources to train. Additionally, despite their common usage, we found min-max normalization to be slightly detrimental overall, and band-passing to make no measurable difference. We found the blind approach to pre-processing of ECGs for multi-label classification to be ineffective, with the exception of sample rate reduction which reliably reduces computational resources, but does not increase accuracy.
2.0CVJul 31, 2024
Adaptive Mix for Semi-Supervised Medical Image SegmentationZhiqiang Shen, Peng Cao, Junming Su et al.
Mix-up is a key technique for consistency regularization-based semi-supervised learning methods, blending two or more images to generate strong-perturbed samples for strong-weak pseudo supervision. Existing mix-up operations are performed either randomly or with predefined fixed rules, such as replacing low-confidence patches with high-confidence ones. The former lacks control over the perturbation degree, leading to overfitting on randomly perturbed samples, while the latter tends to generate images with trivial perturbations, both of which limit the effectiveness of consistency regularization. This paper aims to answer the following question: How can image mix-up perturbation be adaptively performed during training? To this end, we propose an Adaptive Mix algorithm (AdaMix) for image mix-up in a self-paced learning manner. Given that, in general, a model's performance gradually improves during training, AdaMix is equipped with a self-paced curriculum that, in the initial training stage, provides relatively simple perturbed samples and then gradually increases the difficulty of perturbed images by adaptively controlling the perturbation degree based on the model's learning state estimated by a self-paced regularize. We develop three frameworks with our AdaMix, i.e., AdaMix-ST, AdaMix-MT, and AdaMix-CT, for semi-supervised medical image segmentation. Extensive experiments on three public datasets show that the proposed frameworks can achieve superior performance. For example, compared with the state-of-the-art, AdaMix-CT achieves relative improvements of 2.62% in Dice similarity coefficient and 48.25% in average surface distance on the ACDC dataset with 10% labeled data. The results demonstrate that mix-up operations with dynamically adjusted perturbation strength based on the segmentation model's state can significantly enhance the effectiveness of consistency regularization.
1.9CLJul 22, 2024
SETTP: Style Extraction and Tunable Inference via Dual-level Transferable Prompt LearningChunzhen Jin, Yongfeng Huang, Yaqi Wang et al.
Text style transfer, an important research direction in natural language processing, aims to adapt the text to various preferences but often faces challenges with limited resources. In this work, we introduce a novel method termed Style Extraction and Tunable Inference via Dual-level Transferable Prompt Learning (SETTP) for effective style transfer in low-resource scenarios. First, SETTP learns source style-level prompts containing fundamental style characteristics from high-resource style transfer. During training, the source style-level prompts are transferred through an attention module to derive a target style-level prompt for beneficial knowledge provision in low-resource style transfer. Additionally, we propose instance-level prompts obtained by clustering the target resources based on the semantic content to reduce semantic bias. We also propose an automated evaluation approach of style similarity based on alignment with human evaluations using ChatGPT-4. Our experiments across three resourceful styles show that SETTP requires only 1/20th of the data volume to achieve performance comparable to state-of-the-art methods. In tasks involving scarce data like writing style and role style, SETTP outperforms previous methods by 16.24\%.
2.6LGJul 21, 2024
Enhancing Hardware Fault Tolerance in Machines with Reinforcement Learning Policy Gradient AlgorithmsSheila Schoepp, Mehran Taghian, Shotaro Miwa et al.
Industry is rapidly moving towards fully autonomous and interconnected systems that can detect and adapt to changing conditions, including machine hardware faults. Traditional methods for adding hardware fault tolerance to machines involve duplicating components and algorithmically reconfiguring a machine's processes when a fault occurs. However, the growing interest in reinforcement learning-based robotic control offers a new perspective on achieving hardware fault tolerance. However, limited research has explored the potential of these approaches for hardware fault tolerance in machines. This paper investigates the potential of two state-of-the-art reinforcement learning algorithms, Proximal Policy Optimization (PPO) and Soft Actor-Critic (SAC), to enhance hardware fault tolerance into machines. We assess the performance of these algorithms in two OpenAI Gym simulated environments, Ant-v2 and FetchReach-v1. Robot models in these environments are subjected to six simulated hardware faults. Additionally, we conduct an ablation study to determine the optimal method for transferring an agent's knowledge, acquired through learning in a normal (pre-fault) environment, to a (post-)fault environment in a continual learning setting. Our results demonstrate that reinforcement learning-based approaches can enhance hardware fault tolerance in simulated machines, with adaptation occurring within minutes. Specifically, PPO exhibits the fastest adaptation when retaining the knowledge within its models, while SAC performs best when discarding all acquired knowledge. Overall, this study highlights the potential of reinforcement learning-based approaches, such as PPO and SAC, for hardware fault tolerance in machines. These findings pave the way for the development of robust and adaptive machines capable of effectively operating in real-world scenarios.
ConStyX: Content Style Augmentation for Generalizable Medical Image SegmentationXi Chen, Zhiqiang Shen, Peng Cao et al.
Medical images are usually collected from multiple domains, leading to domain shifts that impair the performance of medical image segmentation models. Domain Generalization (DG) aims to address this issue by training a robust model with strong generalizability. Recently, numerous domain randomization-based DG methods have been proposed. However, these methods suffer from the following limitations: 1) constrained efficiency of domain randomization due to their exclusive dependence on image style perturbation, and 2) neglect of the adverse effects of over-augmented images on model training. To address these issues, we propose a novel domain randomization-based DG method, called content style augmentation (ConStyX), for generalizable medical image segmentation. Specifically, ConStyX 1) augments the content and style of training data, allowing the augmented training data to better cover a wider range of data domains, and 2) leverages well-augmented features while mitigating the negative effects of over-augmented features during model training. Extensive experiments across multiple domains demonstrate that our ConStyX achieves superior generalization performance. The code is available at https://github.com/jwxsp1/ConStyX.
6.7CLNov 14, 2025
Improving LLM's Attachment to External Knowledge In Dialogue Generation Tasks Through Entity AnonymizationHadi Sheikhi, Chenyang Huang, Osmar R. Zaïane
Knowledge graph-based dialogue generation (KG-DG) is a challenging task requiring models to effectively incorporate external knowledge into conversational responses. While large language models (LLMs) have achieved impressive results across various NLP tasks, their ability to utilize external knowledge in KG-DG remains under-explored. We observe that LLMs often rely on internal knowledge, leading to detachment from provided knowledge graphs, even when they are given a flawlessly retrieved knowledge graph. First, we introduce LLM-KAT, an evaluation procedure for measuring knowledge attachment in generated responses. Second, we propose a simple yet effective entity anonymization technique to encourage LLMs to better leverage external knowledge. Experiments on the OpenDialKG dataset demonstrate that our approach improves LLMs' attachment on external knowledge.
SynMatch: Rethinking Consistency in Medical Image Segmentation with Sparse AnnotationsZhiqiang Shen, Peng Cao, Xiaoli Liu et al.
Label scarcity remains a major challenge in deep learning-based medical image segmentation. Recent studies use strong-weak pseudo supervision to leverage unlabeled data. However, performance is often hindered by inconsistencies between pseudo labels and their corresponding unlabeled images. In this work, we propose \textbf{SynMatch}, a novel framework that sidesteps the need for improving pseudo labels by synthesizing images to match them instead. Specifically, SynMatch synthesizes images using texture and shape features extracted from the same segmentation model that generates the corresponding pseudo labels for unlabeled images. This design enables the generation of highly consistent synthesized-image-pseudo-label pairs without requiring any training parameters for image synthesis. We extensively evaluate SynMatch across diverse medical image segmentation tasks under semi-supervised learning (SSL), weakly-supervised learning (WSL), and barely-supervised learning (BSL) settings with increasingly limited annotations. The results demonstrate that SynMatch achieves superior performance, especially in the most challenging BSL setting. For example, it outperforms the recent strong-weak pseudo supervision-based method by 29.71\% and 10.05\% on the polyp segmentation task with 5\% and 10\% scribble annotations, respectively. The code will be released at https://github.com/Senyh/SynMatch.
Rethinking Barely-Supervised Volumetric Medical Image Segmentation from an Unsupervised Domain Adaptation PerspectiveZhiqiang Shen, Peng Cao, Junming Su et al.
This paper investigates an extremely challenging problem: barely-supervised volumetric medical image segmentation (BSS). A BSS training dataset consists of two parts: 1) a barely-annotated labeled set, where each labeled image contains only a single-slice annotation, and 2) an unlabeled set comprising numerous unlabeled volumetric images. State-of-the-art BSS methods employ a registration-based paradigm, which uses inter-slice image registration to propagate single-slice annotations into volumetric pseudo labels, constructing a completely annotated labeled set, to which a semi-supervised segmentation scheme can be applied. However, the paradigm has a critical limitation: the pseudo-labels generated by image registration are unreliable and noisy. Motivated by this, we propose a new perspective: instead of solving BSS within a semi-supervised learning scheme, this work formulates BSS as an unsupervised domain adaptation problem. To this end, we propose a novel BSS framework, \textbf{B}arely-supervised learning \textbf{via} unsupervised domain \textbf{A}daptation (BvA), as an alternative to the dominant registration paradigm. Specifically, we first design a novel noise-free labeled data construction algorithm (NFC) for slice-to-volume labeled data synthesis. Then, we introduce a frequency and spatial Mix-Up strategy (FSX) to mitigate the domain shifts. Extensive experiments demonstrate that our method provides a promising alternative for BSS. Remarkably, the proposed method, trained on the left atrial segmentation dataset with \textbf{only one} barely-labeled image, achieves a Dice score of 81.20%, outperforming the state-of-the-art by 61.71%. The code is available at https://github.com/Senyh/BvA.
Narrowing the semantic gaps in U-Net with learnable skip connections: The case of medical image segmentationHaonan Wang, Peng Cao, Xiaoli Liu et al.
Most state-of-the-art methods for medical image segmentation adopt the encoder-decoder architecture. However, this U-shaped framework still has limitations in capturing the non-local multi-scale information with a simple skip connection. To solve the problem, we firstly explore the potential weakness of skip connections in U-Net on multiple segmentation tasks, and find that i) not all skip connections are useful, each skip connection has different contribution; ii) the optimal combinations of skip connections are different, relying on the specific datasets. Based on our findings, we propose a new segmentation framework, named UDTransNet, to solve three semantic gaps in U-Net. Specifically, we propose a Dual Attention Transformer (DAT) module for capturing the channel- and spatial-wise relationships to better fuse the encoder features, and a Decoder-guided Recalibration Attention (DRA) module for effectively connecting the DAT tokens and the decoder features to eliminate the inconsistency. Hence, both modules establish a learnable connection to solve the semantic gaps between the encoder and the decoder, which leads to a high-performance segmentation model for medical images. Comprehensive experimental results indicate that our UDTransNet produces higher evaluation scores and finer segmentation results with relatively fewer parameters over the state-of-the-art segmentation methods on different public datasets. Code: https://github.com/McGregorWwww/UDTransNet.
UCTransNet: Rethinking the Skip Connections in U-Net from a Channel-wise Perspective with TransformerHaonan Wang, Peng Cao, Jiaqi Wang et al.
Most recent semantic segmentation methods adopt a U-Net framework with an encoder-decoder architecture. It is still challenging for U-Net with a simple skip connection scheme to model the global multi-scale context: 1) Not each skip connection setting is effective due to the issue of incompatible feature sets of encoder and decoder stage, even some skip connection negatively influence the segmentation performance; 2) The original U-Net is worse than the one without any skip connection on some datasets. Based on our findings, we propose a new segmentation framework, named UCTransNet (with a proposed CTrans module in U-Net), from the channel perspective with attention mechanism. Specifically, the CTrans module is an alternate of the U-Net skip connections, which consists of a sub-module to conduct the multi-scale Channel Cross fusion with Transformer (named CCT) and a sub-module Channel-wise Cross-Attention (named CCA) to guide the fused multi-scale channel-wise information to effectively connect to the decoder features for eliminating the ambiguity. Hence, the proposed connection consisting of the CCT and CCA is able to replace the original skip connection to solve the semantic gaps for an accurate automatic medical image segmentation. The experimental results suggest that our UCTransNet produces more precise segmentation performance and achieves consistent improvements over the state-of-the-art for semantic segmentation across different datasets and conventional architectures involving transformer or U-shaped framework. Code: https://github.com/McGregorWwww/UCTransNet.
U$^2$-Net: Going Deeper with Nested U-Structure for Salient Object DetectionXuebin Qin, Zichen Zhang, Chenyang Huang et al.
In this paper, we design a simple yet powerful deep network architecture, U$^2$-Net, for salient object detection (SOD). The architecture of our U$^2$-Net is a two-level nested U-structure. The design has the following advantages: (1) it is able to capture more contextual information from different scales thanks to the mixture of receptive fields of different sizes in our proposed ReSidual U-blocks (RSU), (2) it increases the depth of the whole architecture without significantly increasing the computational cost because of the pooling operations used in these RSU blocks. This architecture enables us to train a deep network from scratch without using backbones from image classification tasks. We instantiate two models of the proposed architecture, U$^2$-Net (176.3 MB, 30 FPS on GTX 1080Ti GPU) and U$^2$-Net$^{\dagger}$ (4.7 MB, 40 FPS), to facilitate the usage in different environments. Both models achieve competitive performance on six SOD datasets. The code is available: https://github.com/NathanUA/U-2-Net.
3.7CVApr 7, 2024
A Clinical-oriented Multi-level Contrastive Learning Method for Disease Diagnosis in Low-quality Medical ImagesQingshan Hou, Shuai Cheng, Peng Cao et al.
Representation learning offers a conduit to elucidate distinctive features within the latent space and interpret the deep models. However, the randomness of lesion distribution and the complexity of low-quality factors in medical images pose great challenges for models to extract key lesion features. Disease diagnosis methods guided by contrastive learning (CL) have shown significant advantages in lesion feature representation. Nevertheless, the effectiveness of CL is highly dependent on the quality of the positive and negative sample pairs. In this work, we propose a clinical-oriented multi-level CL framework that aims to enhance the model's capacity to extract lesion features and discriminate between lesion and low-quality factors, thereby enabling more accurate disease diagnosis from low-quality medical images. Specifically, we first construct multi-level positive and negative pairs to enhance the model's comprehensive recognition capability of lesion features by integrating information from different levels and qualities of medical images. Moreover, to improve the quality of the learned lesion embeddings, we introduce a dynamic hard sample mining method based on self-paced learning. The proposed CL framework is validated on two public medical image datasets, EyeQ and Chest X-ray, demonstrating superior performance compared to other state-of-the-art disease diagnostic methods.
11.3IVMar 22, 2025
FundusGAN: A Hierarchical Feature-Aware Generative Framework for High-Fidelity Fundus Image GenerationQingshan Hou, Meng Wang, Peng Cao et al.
Recent advancements in ophthalmology foundation models such as RetFound have demonstrated remarkable diagnostic capabilities but require massive datasets for effective pre-training, creating significant barriers for development and deployment. To address this critical challenge, we propose FundusGAN, a novel hierarchical feature-aware generative framework specifically designed for high-fidelity fundus image synthesis. Our approach leverages a Feature Pyramid Network within its encoder to comprehensively extract multi-scale information, capturing both large anatomical structures and subtle pathological features. The framework incorporates a modified StyleGAN-based generator with dilated convolutions and strategic upsampling adjustments to preserve critical retinal structures while enhancing pathological detail representation. Comprehensive evaluations on the DDR, DRIVE, and IDRiD datasets demonstrate that FundusGAN consistently outperforms state-of-the-art methods across multiple metrics (SSIM: 0.8863, FID: 54.2, KID: 0.0436 on DDR). Furthermore, disease classification experiments reveal that augmenting training data with FundusGAN-generated images significantly improves diagnostic accuracy across multiple CNN architectures (up to 6.49\% improvement with ResNet50). These results establish FundusGAN as a valuable foundation model component that effectively addresses data scarcity challenges in ophthalmological AI research, enabling more robust and generalizable diagnostic systems while reducing dependency on large-scale clinical data collection.
Multilingual Non-Autoregressive Machine Translation without Knowledge DistillationChenyang Huang, Fei Huang, Zaixiang Zheng et al.
Multilingual neural machine translation (MNMT) aims at using one single model for multiple translation directions. Recent work applies non-autoregressive Transformers to improve the efficiency of MNMT, but requires expensive knowledge distillation (KD) processes. To this end, we propose an M-DAT approach to non-autoregressive multilingual machine translation. Our system leverages the recent advance of the directed acyclic Transformer (DAT), which does not require KD. We further propose a pivot back-translation (PivotBT) approach to improve the generalization to unseen translation directions. Experiments show that our M-DAT achieves state-of-the-art performance in non-autoregressive MNMT.
4.9CLOct 20, 2025
Explainability of Large Language Models: Opportunities and Challenges toward Generating Trustworthy ExplanationsShahin Atakishiyev, Housam K. B. Babiker, Jiayi Dai et al.
Large language models have exhibited impressive performance across a broad range of downstream tasks in natural language processing. However, how a language model predicts the next token and generates content is not generally understandable by humans. Furthermore, these models often make errors in prediction and reasoning, known as hallucinations. These errors underscore the urgent need to better understand and interpret the intricate inner workings of language models and how they generate predictive outputs. Motivated by this gap, this paper investigates local explainability and mechanistic interpretability within Transformer-based large language models to foster trust in such models. In this regard, our paper aims to make three key contributions. First, we present a review of local explainability and mechanistic interpretability approaches and insights from relevant studies in the literature. Furthermore, we describe experimental studies on explainability and reasoning with large language models in two critical domains -- healthcare and autonomous driving -- and analyze the trust implications of such explanations for explanation receivers. Finally, we summarize current unaddressed issues in the evolving landscape of LLM explainability and outline the opportunities, critical challenges, and future directions toward generating human-aligned, trustworthy LLM explanations.
A Decoding Algorithm for Length-Control Summarization Based on Directed Acyclic TransformersChenyang Huang, Hao Zhou, Cameron Jen et al.
Length-control summarization aims to condense long texts into a short one within a certain length limit. Previous approaches often use autoregressive (AR) models and treat the length requirement as a soft constraint, which may not always be satisfied. In this study, we propose a novel length-control decoding algorithm based on the Directed Acyclic Transformer (DAT). Our approach allows for multiple plausible sequence fragments and predicts a \emph{path} to connect them. In addition, we propose a Sequence Maximum a Posteriori (SeqMAP) decoding algorithm that marginalizes different possible paths and finds the most probable summary satisfying the length budget. Our algorithm is based on beam search, which further facilitates a reranker for performance improvement. Experimental results on the Gigaword and DUC2004 datasets demonstrate our state-of-the-art performance for length-control summarization.
OTTAWA: Optimal TransporT Adaptive Word Aligner for Hallucination and Omission Translation Errors DetectionChenyang Huang, Abbas Ghaddar, Ivan Kobyzev et al.
Recently, there has been considerable attention on detecting hallucinations and omissions in Machine Translation (MT) systems. The two dominant approaches to tackle this task involve analyzing the MT system's internal states or relying on the output of external tools, such as sentence similarity or MT quality estimators. In this work, we introduce OTTAWA, a novel Optimal Transport (OT)-based word aligner specifically designed to enhance the detection of hallucinations and omissions in MT systems. Our approach explicitly models the missing alignments by introducing a "null" vector, for which we propose a novel one-side constrained OT setting to allow an adaptive null alignment. Our approach yields competitive results compared to state-of-the-art methods across 18 language pairs on the HalOmi benchmark. In addition, it shows promising features, such as the ability to distinguish between both error types and perform word-level detection without accessing the MT system's internal states.
1.2MMJan 28, 2022
UofA-Truth at Factify 2022 : Transformer And Transfer Learning Based Multi-Modal Fact-CheckingAbhishek Dhankar, Osmar R. Zaïane, Francois Bolduc
Identifying fake news is a very difficult task, especially when considering the multiple modes of conveying information through text, image, video and/or audio. We attempted to tackle the problem of automated misinformation/disinformation detection in multi-modal news sources (including text and images) through our simple, yet effective, approach in the FACTIFY shared task at De-Factify@AAAI2022. Our model produced an F1-weighted score of 74.807%, which was the fourth best out of all the submissions. In this paper we will explain our approach to undertake the shared task.
Non-Autoregressive Translation with Layer-Wise Prediction and Deep SupervisionChenyang Huang, Hao Zhou, Osmar R. Zaïane et al.
How do we perform efficient inference while retaining high translation quality? Existing neural machine translation models, such as Transformer, achieve high performance, but they decode words one by one, which is inefficient. Recent non-autoregressive translation models speed up the inference, but their quality is still inferior. In this work, we propose DSLP, a highly efficient and high-performance model for machine translation. The key insight is to train a non-autoregressive Transformer with Deep Supervision and feed additional Layer-wise Predictions. We conducted extensive experiments on four translation tasks (both directions of WMT'14 EN-DE and WMT'16 EN-RO). Results show that our approach consistently improves the BLEU scores compared with respective base models. Specifically, our best variant outperforms the autoregressive model on three translation tasks, while being 14.8 times more efficient in inference.
0.2CLJun 24, 2021
A comprehensive empirical analysis on cross-domain semantic enrichment for detection of depressive languageNawshad Farruque, Randy Goebel, Osmar Zaiane
We analyze the process of creating word embedding feature representations designed for a learning task when annotated data is scarce, for example, in depressive language detection from Tweets. We start with a rich word embedding pre-trained from a large general dataset, which is then augmented with embeddings learned from a much smaller and more specific domain dataset through a simple non-linear mapping mechanism. We also experimented with several other more sophisticated methods of such mapping including, several auto-encoder based and custom loss-function based methods that learn embedding representations through gradually learning to be close to the words of similar semantics and distant to dissimilar semantics. Our strengthened representations better capture the semantics of the depression domain, as it combines the semantics learned from the specific domain coupled with word coverage from the general language. We also present a comparative performance analyses of our word embedding representations with a simple bag-of-words model, well known sentiment and psycholinguistic lexicons, and a general pre-trained word embedding. When used as feature representations for several different machine learning methods, including deep learning models in a depressive Tweets identification task, we show that our augmented word embedding representations achieve a significantly better F1 score than the others, specially when applied to a high quality dataset. Also, we present several data ablation tests which confirm the efficacy of our augmentation techniques.
0.2CLJun 21, 2021
STEP-EZ: Syntax Tree guided semantic ExPlanation for Explainable Zero-shot modeling of clinical depression symptoms from textNawshad Farruque, Randy Goebel, Osmar Zaiane et al.
We focus on exploring various approaches of Zero-Shot Learning (ZSL) and their explainability for a challenging yet important supervised learning task notorious for training data scarcity, i.e. Depression Symptoms Detection (DSD) from text. We start with a comprehensive synthesis of different components of our ZSL modeling and analysis of our ground truth samples and Depression symptom clues curation process with the help of a practicing clinician. We next analyze the accuracy of various state-of-the-art ZSL models and their potential enhancements for our task. Further, we sketch a framework for the use of ZSL for hierarchical text-based explanation mechanism, which we call, Syntax Tree-Guided Semantic Explanation (STEP). Finally, we summarize experiments from which we conclude that we can use ZSL models and achieve reasonable accuracy and explainability, measured by a proposed Explainability Index (EI). This work is, to our knowledge, the first work to exhaustively explore the efficacy of ZSL models for DSD task, both in terms of accuracy and explainability.
31.5CLJun 7, 2021
A Globally Normalized Neural Model for Semantic ParsingChenyang Huang, Wei Yang, Yanshuai Cao et al.
In this paper, we propose a globally normalized model for context-free grammar (CFG)-based semantic parsing. Instead of predicting a probability, our model predicts a real-valued score at each step and does not suffer from the label bias problem. Experiments show that our approach outperforms locally normalized models on small datasets, but it does not yield improvement on a large dataset.
3.1LGMay 26, 2021
Basic and Depression Specific Emotion Identification in Tweets: Multi-label Classification ExperimentsNawshad Farruque, Chenyang Huang, Osmar Zaiane et al.
In this paper, we present empirical analysis on basic and depression specific multi-emotion mining in Tweets with the help of state of the art multi-label classifiers. We choose our basic emotions from a hybrid emotion model consisting of the common emotions from four highly regarded psychological models of emotions. Moreover, we augment that emotion model with new emotion categories because of their importance in the analysis of depression. Most of those additional emotions have not been used in previous emotion mining research. Our experimental analyses show that a cost sensitive RankSVM algorithm and a Deep Learning model are both robust, measured by both Macro F-measures and Micro F-measures. This suggests that these algorithms are superior in addressing the widely known data imbalance problem in multi-label learning. Moreover, our application of Deep Learning performs the best, giving it an edge in modeling deep semantic features of our extended emotional categories.
Neural Path Hunter: Reducing Hallucination in Dialogue Systems via Path GroundingNouha Dziri, Andrea Madotto, Osmar Zaiane et al.
Dialogue systems powered by large pre-trained language models (LM) exhibit an innate ability to deliver fluent and natural-looking responses. Despite their impressive generation performance, these models can often generate factually incorrect statements impeding their widespread adoption. In this paper, we focus on the task of improving the faithfulness -- and thus reduce hallucination -- of Neural Dialogue Systems to known facts supplied by a Knowledge Graph (KG). We propose Neural Path Hunter which follows a generate-then-refine strategy whereby a generated response is amended using the k-hop subgraph of a KG. Neural Path Hunter leverages a separate token-level fact critic to identify plausible sources of hallucination followed by a refinement stage consisting of a chain of two neural LM's that retrieves correct entities by crafting a query signal that is propagated over the k-hop subgraph. Our proposed model can easily be applied to any dialogue generated responses without retraining the model. We empirically validate our proposed approach on the OpenDialKG dataset against a suite of metrics and report a relative improvement of faithfulness over dialogue responses by 20.35% based on FeQA (Durmus et al., 2020).
1.2LGJul 4, 2020
Building a Competitive Associative ClassifierNitakshi Sood, Osmar Zaiane
With the huge success of deep learning, other machine learning paradigms have had to take back seat. Yet other models, particularly rule-based, are more readable and explainable and can even be competitive when labelled data is not abundant. However, most of the existing rule-based classifiers suffer from the production of a large number of classification rules, affecting the model readability. This hampers the classification accuracy as noisy rules might not add any useful informationfor classification and also lead to longer classification time. In this study, we propose SigD2 which uses a novel, two-stage pruning strategy which prunes most of the noisy, redundant and uninteresting rules and makes the classification model more accurate and readable. To make SigDirect more competitive with the most prevalent but uninterpretable machine learning-based classifiers like neural networks and support vector machines, we propose bagging and boosting on the ensemble of the SigDirect classifier. The results of the proposed algorithms are quite promising and we are able to obtain a minimal set of statistically significant rules for classification without jeopardizing the classification accuracy. We use 15 UCI datasets and compare our approach with eight existing systems.The SigD2 and boosted SigDirect (ACboost) ensemble model outperform various state-of-the-art classifiers not only in terms of classification accuracy but also in terms of the number of rules.
ANA at SemEval-2020 Task 4: mUlti-task learNIng for cOmmonsense reasoNing (UNION)Anandh Perumal, Chenyang Huang, Amine Trabelsi et al.
In this paper, we describe our mUlti-task learNIng for cOmmonsense reasoNing (UNION) system submitted for Task C of the SemEval2020 Task 4, which is to generate a reason explaining why a given false statement is non-sensical. However, we found in the early experiments that simple adaptations such as fine-tuning GPT2 often yield dull and non-informative generations (e.g. simple negations). In order to generate more meaningful explanations, we propose UNION, a unified end-to-end framework, to utilize several existing commonsense datasets so that it allows a model to learn more dynamics under the scope of commonsense reasoning. In order to perform model selection efficiently, accurately and promptly, we also propose a couple of auxiliary automatic evaluation metrics so that we can extensively compare the models from different perspectives. Our submitted system not only results in a good performance in the proposed metrics but also outperforms its competitors with the highest achieved score of 2.10 for human evaluation while remaining a BLEU score of 15.7. Our code is made publicly available at GitHub.
14.5AIMay 5, 2020
A multi-component framework for the analysis and design of explainable artificial intelligenceS. Atakishiyev, H. Babiker, N. Farruque et al.
The rapid growth of research in explainable artificial intelligence (XAI) follows on two substantial developments. First, the enormous application success of modern machine learning methods, especially deep and reinforcement learning, which have created high expectations for industrial, commercial and social value. Second, the emergence of concern for creating trusted AI systems, including the creation of regulatory principles to ensure transparency and trust of AI systems.These two threads have created a kind of "perfect storm" of research activity, all eager to create and deliver it any set of tools and techniques to address the XAI demand. As some surveys of current XAI suggest, there is yet to appear a principled framework that respects the literature of explainability in the history of science, and which provides a basis for the development of a framework for transparent XAI. Here we intend to provide a strategic inventory of XAI requirements, demonstrate their connection to a history of XAI ideas, and synthesize those ideas into a simple framework to calibrate five successive levels of XAI.
13.8AIJan 26, 2020
Sentiment and Knowledge Based Algorithmic Trading with Deep Reinforcement LearningAbhishek Nan, Anandh Perumal, Osmar R. Zaiane
Algorithmic trading, due to its inherent nature, is a difficult problem to tackle; there are too many variables involved in the real world which make it almost impossible to have reliable algorithms for automated stock trading. The lack of reliable labelled data that considers physical and physiological factors that dictate the ups and downs of the market, has hindered the supervised learning attempts for dependable predictions. To learn a good policy for trading, we formulate an approach using reinforcement learning which uses traditional time series stock price data and combines it with news headline sentiments, while leveraging knowledge graphs for exploiting news about implicit relationships.
1.3CLNov 6, 2019
Seq2Emo for Multi-label Emotion Classification Based on Latent Variable Chains TransformationChenyang Huang, Amine Trabelsi, Xuebin Qin et al.
Emotion detection in text is an important task in NLP and is essential in many applications. Most of the existing methods treat this task as a problem of single-label multi-class text classification. To predict multiple emotions for one instance, most of the existing works regard it as a general Multi-label Classification (MLC) problem, where they usually either apply a manually determined threshold on the last output layer of their neural network models or train multiple binary classifiers and make predictions in the fashion of one-vs-all. However, compared to labels in the general MLC datasets, the number of emotion categories are much fewer (less than 10). Additionally, emotions tend to have more correlations with each other. For example, the human usually does not express "joy" and "anger" at the same time, but it is very likely to have "joy" and "love" expressed together. Given this intuition, in this paper, we propose a Latent Variable Chain (LVC) transformation and a tailored model -- Seq2Emo model that not only naturally predicts multiple emotion labels but also takes into consideration their correlations. We perform the experiments on the existing multi-label emotion datasets as well as on our newly collected datasets. The results show that our model compares favorably with existing state-of-the-art methods.
30.0CLSep 11, 2019
Self-Attentional Models Application in Task-Oriented Dialogue Generation SystemsMansour Saffar Mehrjardi, Amine Trabelsi, Osmar R. Zaiane
Self-attentional models are a new paradigm for sequence modelling tasks which differ from common sequence modelling methods, such as recurrence-based and convolution-based sequence learning, in the way that their architecture is only based on the attention mechanism. Self-attentional models have been used in the creation of the state-of-the-art models in many NLP tasks such as neural machine translation, but their usage has not been explored for the task of training end-to-end task-oriented dialogue generation systems yet. In this study, we apply these models on the three different datasets for training task-oriented chatbots. Our finding shows that self-attentional models can be exploited to create end-to-end task-oriented chatbots which not only achieve higher evaluation scores compared to recurrence-based models, but also do so more efficiently.
0.5CLAug 1, 2019
Contrastive Reasons Detection and Clustering from Online Polarized DebateAmine Trabelsi, Osmar R. Zaiane
This work tackles the problem of unsupervised modeling and extraction of the main contrastive sentential reasons conveyed by divergent viewpoints on polarized issues. It proposes a pipeline approach centered around the detection and clustering of phrases, assimilated to argument facets using a novel Phrase Author Interaction Topic-Viewpoint model. The evaluation is based on the informativeness, the relevance and the clustering accuracy of extracted reasons. The pipeline approach shows a significant improvement over state-of-the-art methods in contrastive summarization on online debate datasets.
Evaluating Coherence in Dialogue Systems using EntailmentNouha Dziri, Ehsan Kamalloo, Kory W. Mathewson et al.
Evaluating open-domain dialogue systems is difficult due to the diversity of possible correct answers. Automatic metrics such as BLEU correlate weakly with human annotations, resulting in a significant bias across different models and datasets. Some researchers resort to human judgment experimentation for assessing response quality, which is expensive, time consuming, and not scalable. Moreover, judges tend to evaluate a small number of dialogues, meaning that minor differences in evaluation configuration may lead to dissimilar results. In this paper, we present interpretable metrics for evaluating topic coherence by making use of distributed sentence representations. Furthermore, we introduce calculable approximations of human judgment based on conversational coherence by adopting state-of-the-art entailment techniques. Results show that our metrics can be used as a surrogate for human judgment, making it easy to evaluate dialogue systems on large-scale datasets and allowing an unbiased estimate for the quality of the responses.
ANA at SemEval-2019 Task 3: Contextual Emotion detection in Conversations through hierarchical LSTMs and BERTChenyang Huang, Amine Trabelsi, Osmar R. Zaïane
This paper describes the system submitted by ANA Team for the SemEval-2019 Task 3: EmoContext. We propose a novel Hierarchical LSTMs for Contextual Emotion Detection (HRLCE) model. It classifies the emotion of an utterance given its conversational context. The results show that, in this task, our HRCLE outperforms the most recent state-of-the-art text classification framework: BERT. We combine the results generated by BERT and HRCLE to achieve an overall score of 0.7709 which ranked 5th on the final leader board of the competition among 165 Teams.
0.2CLNov 15, 2018
On Generality and Knowledge Transferability in Cross-Domain Duplicate Question Detection for Heterogeneous Community Question AnsweringMohomed Shazan Mohomed Jabbar, Luke Kumar, Hamman Samuel et al.
Duplicate question detection is an ongoing challenge in community question answering because semantically equivalent questions can have significantly different words and structures. In addition, the identification of duplicate questions can reduce the resources required for retrieval, when the same questions are not repeated. This study compares the performance of deep neural networks and gradient tree boosting, and explores the possibility of domain adaptation with transfer learning to improve the under-performing target domains for the text-pair duplicates classification task, using three heterogeneous datasets: general-purpose Quora, technical Ask Ubuntu, and academic English Stack Exchange. Ultimately, our study exposes the alternative hypothesis that the meaning of a "duplicate" is not inherently general-purpose, but rather is dependent on the domain of learning, hence reducing the chance of transfer learning through adapting to the domain.
Augmenting Neural Response Generation with Context-Aware Topical AttentionNouha Dziri, Ehsan Kamalloo, Kory W. Mathewson et al.
Sequence-to-Sequence (Seq2Seq) models have witnessed a notable success in generating natural conversational exchanges. Notwithstanding the syntactically well-formed responses generated by these neural network models, they are prone to be acontextual, short and generic. In this work, we introduce a Topical Hierarchical Recurrent Encoder Decoder (THRED), a novel, fully data-driven, multi-turn response generation system intended to produce contextual and topic-aware responses. Our model is built upon the basic Seq2Seq model by augmenting it with a hierarchical joint attention mechanism that incorporates topical concepts and previous interactions into the response generation. To train our model, we provide a clean and high-quality conversational dataset mined from Reddit comments. We evaluate THRED on two novel automated metrics, dubbed Semantic Similarity and Response Echo Index, as well as with human evaluation. Our experiments demonstrate that the proposed model is able to generate more diverse and contextually relevant responses compared to the strong baselines.
3.7LGNov 30, 2017
Comparing Deep Reinforcement Learning and Evolutionary Methods in Continuous ControlShangtong Zhang, Osmar R. Zaiane
Reinforcement Learning and the Evolutionary Strategy are two major approaches in addressing complicated control problems. Both are strong contenders and have their own devotee communities. Both groups have been very active in developing new advances in their own domain and devising, in recent years, leading-edge techniques to address complex continuous control tasks. Here, in the context of Deep Reinforcement Learning, we formulate a parallelized version of the Proximal Policy Optimization method and a Deep Deterministic Policy Gradient method. Moreover, we conduct a thorough comparison between the state-of-the-art techniques in both camps fro continuous control; evolutionary methods and Deep Reinforcement Learning methods. The results show there is no consistent winner.
1.2DBOct 29, 2017
Complexity Analysis Approach for Prefabricated Construction Products Using Uncertain Data ClusteringWenying Ji, Simaan M. AbouRizk, Osmar R. Zaiane et al.
This paper proposes an uncertain data clustering approach to quantitatively analyze the complexity of prefabricated construction components through the integration of quality performance-based measures with associated engineering design information. The proposed model is constructed in three steps, which (1) measure prefabricated construction product complexity (hereafter referred to as product complexity) by introducing a Bayesian-based nonconforming quality performance indicator; (2) score each type of product complexity by developing a Hellinger distance-based distribution similarity measurement; and (3) cluster products into homogeneous complexity groups by using the agglomerative hierarchical clustering technique. An illustrative example is provided to demonstrate the proposed approach, and a case study of an industrial company in Edmonton, Canada, is conducted to validate the feasibility and applicability of the proposed model. This research inventively defines and investigates product complexity from the perspective of product quality performance with design information associated. The research outcomes provide simplified, interpretable, and informative insights for practitioners to better analyze and manage product complexity. In addition to this practical contribution, a novel hierarchical clustering technique is devised. This technique is capable of clustering uncertain data (i.e., beta distributions) with lower computational complexity and has the potential to be generalized to cluster all types of uncertain data.
7.0IRJul 2, 2017
Reciprocal Recommender System for Learners in Massive Open Online Courses (MOOCs)Sankalp Prabhakar, Gerasimos Spanakis, Osmar Zaiane
Massive open online courses (MOOC) describe platforms where users with completely different backgrounds subscribe to various courses on offer. MOOC forums and discussion boards offer learners a medium to communicate with each other and maximize their learning outcomes. However, oftentimes learners are hesitant to approach each other for different reasons (being shy, don't know the right match, etc.). In this paper, we propose a reciprocal recommender system which matches learners who are mutually interested in, and likely to communicate with each other based on their profile attributes like age, location, gender, qualification, interests, etc. We test our algorithm on data sampled using the publicly available MITx-Harvardx dataset and demonstrate that both attribute importance and reciprocity play an important role in forming the final recommendation list of learners. Our approach provides promising results for such a system to be implemented within an actual MOOC.