Shih-Chieh Hsu

Hendrik Borras, Giuseppe Di Guglielmo, Javier Duarte et al.

We present our development experience and recent results for the MLPerf Tiny Inference Benchmark on field-programmable gate array (FPGA) platforms. We use the open-source hls4ml and FINN workflows, which aim to democratize AI-hardware codesign of optimized neural networks on FPGAs. We present the design and implementation process for the keyword spotting, anomaly detection, and image classification benchmark tasks. The resulting hardware implementations are quantized, configurable, spatial dataflow architectures tailored for speed and efficiency and introduce new generic optimizations and common workflows developed as a part of this work. The full workflow is presented from quantization-aware training to FPGA implementation. The solutions are deployed on system-on-chip (Pynq-Z2) and pure FPGA (Arty A7-100T) platforms. The resulting submissions achieve latencies as low as 20 $μ$s and energy consumption as low as 30 $μ$J per inference. We demonstrate how emerging ML benchmarks on heterogeneous hardware platforms can catalyze collaboration and the development of new techniques and more accessible tools.

Jan-Frederik Schulte, Benjamin Ramhorst, Chang Sun et al.

We present hls4ml, a free and open-source platform that translates machine learning (ML) models from modern deep learning frameworks into high-level synthesis (HLS) code that can be integrated into full designs for field-programmable gate arrays (FPGAs) or application-specific integrated circuits (ASICs). With its flexible and modular design, hls4ml supports a large number of deep learning frameworks and can target HLS compilers from several vendors, including Vitis HLS, Intel oneAPI and Catapult HLS. Together with a wider eco-system for software-hardware co-design, hls4ml has enabled the acceleration of ML inference in a wide range of commercial and scientific applications where low latency, resource usage, and power consumption are critical. In this paper, we describe the structure and functionality of the hls4ml platform. The overarching design considerations for the generated HLS code are discussed, together with selected performance results.

Alessandro Pappalardo, Yaman Umuroglu, Michaela Blott et al.

We present extensions to the Open Neural Network Exchange (ONNX) intermediate representation format to represent arbitrary-precision quantized neural networks. We first introduce support for low precision quantization in existing ONNX-based quantization formats by leveraging integer clipping, resulting in two new backward-compatible variants: the quantized operator format with clipping and quantize-clip-dequantize (QCDQ) format. We then introduce a novel higher-level ONNX format called quantized ONNX (QONNX) that introduces three new operators -- Quant, BipolarQuant, and Trunc -- in order to represent uniform quantization. By keeping the QONNX IR high-level and flexible, we enable targeting a wider variety of platforms. We also present utilities for working with QONNX, as well as examples of its usage in the FINN and hls4ml toolchains. Finally, we introduce the QONNX model zoo to share low-precision quantized neural networks.

Elham E Khoda, Dylan Rankin, Rafael Teixeira de Lima et al.

Recurrent neural networks have been shown to be effective architectures for many tasks in high energy physics, and thus have been widely adopted. Their use in low-latency environments has, however, been limited as a result of the difficulties of implementing recurrent architectures on field-programmable gate arrays (FPGAs). In this paper we present an implementation of two types of recurrent neural network layers -- long short-term memory and gated recurrent unit -- within the hls4ml framework. We demonstrate that our implementation is capable of producing effective designs for both small and large models, and can be customized to meet specific design requirements for inference latencies and FPGA resources. We show the performance and synthesized designs for multiple neural networks, many of which are trained specifically for jet identification tasks at the CERN Large Hadron Collider.

Michael James Fenton, Alexander Shmakov, Hideki Okawa et al.

Reconstructing unstable heavy particles requires sophisticated techniques to sift through the large number of possible permutations for assignment of detector objects to the underlying partons. Anapproach based on a generalized attention mechanism, symmetry preserving attention networks (SPA-NET), has been previously applied to top quark pair decays at the Large Hadron Collider which produce only hadronic jets. Here we extend the SPA-NET architecture to consider multiple input object types, such as leptons, as well as global event features, such as the missing transverse momentum. Inaddition, we provide regression and classification outputs to supplement the parton assignment. We explore the performance of the extended capability of SPA-NET in the context of semi-leptonic decays of top quark pairs as well as top quark pairs produced in association with a Higgs boson. We find significant improvements in the power of three representative studies: a search for ttH, a measurement of the top quark mass, and a search for a heavy Z' decaying to top quark pairs. We present ablation studies to provide insight on what the network has learned in each case.

Gabriele Benelli, Thomas Y. Chen, Javier Duarte et al.

The growing role of data science (DS) and machine learning (ML) in high-energy physics (HEP) is well established and pertinent given the complex detectors, large data, sets and sophisticated analyses at the heart of HEP research. Moreover, exploiting symmetries inherent in physics data have inspired physics-informed ML as a vibrant sub-field of computer science research. HEP researchers benefit greatly from materials widely available materials for use in education, training and workforce development. They are also contributing to these materials and providing software to DS/ML-related fields. Increasingly, physics departments are offering courses at the intersection of DS, ML and physics, often using curricula developed by HEP researchers and involving open software and data used in HEP. In this white paper, we explore synergies between HEP research and DS/ML education, discuss opportunities and challenges at this intersection, and propose community activities that will be mutually beneficial.

Shi-Yu Huang, Yun-Chen Yang, Yu-Ru Su et al.

In-time particle trajectory reconstruction in the Large Hadron Collider is challenging due to the high collision rate and numerous particle hits. Using GNN (Graph Neural Network) on FPGA has enabled superior accuracy with flexible trajectory classification. However, existing GNN architectures have inefficient resource usage and insufficient parallelism for edge classification. This paper introduces a resource-efficient GNN architecture on FPGAs for low latency particle tracking. The modular architecture facilitates design scalability to support large graphs. Leveraging the geometric properties of hit detectors further reduces graph complexity and resource usage. Our results on Xilinx UltraScale+ VU9P demonstrate 1625x and 1574x performance improvement over CPU and GPU respectively.

Zhixing Jiang, Dennis Yin, Yihui Chen et al.

This study presents an efficient implementation of transformer architectures in Field-Programmable Gate Arrays(FPGAs) using hls4ml. We demonstrate the strategy for implementing the multi-head attention, softmax, and normalization layer and evaluate three distinct models. Their deployment on VU13P FPGA chip achieved latency less than 2us, demonstrating the potential for real-time applications. HLS4ML compatibility with any TensorFlow-built transformer model further enhances the scalability and applicability of this work. Index Terms: FPGAs, machine learning, transformers, high energy physics, LIGO

Kingman Cheung, Yi-Lun Chung, Shih-Chieh Hsu et al.

The modeling of jet substructure significantly differs between Parton Shower Monte Carlo (PSMC) programs. Despite this, we observe that machine learning classifiers trained on different PSMCs learn nearly the same function. This means that when these classifiers are applied to the same PSMC for testing, they result in nearly the same performance. This classifier universality indicates that a machine learning model trained on one simulation and tested on another simulation (or data) will likely be optimal. Our observations are based on detailed studies of shallow and deep neural networks applied to simulated Lorentz boosted Higgs jet tagging at the LHC.

Ting-Hsiang Hsu, Bai-Hong Zhou, Qibin Liu et al.

While deep learning is transforming data analysis in high-energy physics, computational challenges limit its potential. We address these challenges in the context of collider physics by introducing EveNet, an event-level foundation model pretrained on 500 million simulated collision events using a hybrid objective of self-supervised learning and physics-informed supervision. By leveraging a shared particle-cloud representation, EveNet outperforms state-of-the-art baselines across diverse tasks, including searches for heavy resonances and exotic Higgs decays, and demonstrates exceptional data efficiency in low-statistics regimes. Crucially, we validate the transferability of the model to experimental data by rediscovering the $Υ$ meson in CMS Open Data and show its capacity for precision physics through the robust extraction of quantum correlation observables stable against systematic uncertainties. These results indicate that EveNet can successfully encode the fundamental physical structure of particle interactions, which offers a unified and resource-efficient framework to accelerate discovery at current and future colliders.

Alexander Shmakov, Michael James Fenton, Ta-Wei Ho et al.

The creation of unstable heavy particles at the Large Hadron Collider is the most direct way to address some of the deepest open questions in physics. Collisions typically produce variable-size sets of observed particles which have inherent ambiguities complicating the assignment of observed particles to the decay products of the heavy particles. Current strategies for tackling these challenges in the physics community ignore the physical symmetries of the decay products and consider all possible assignment permutations and do not scale to complex configurations. Attention based deep learning methods for sequence modelling have achieved state-of-the-art performance in natural language processing, but they lack built-in mechanisms to deal with the unique symmetries found in physical set-assignment problems. We introduce a novel method for constructing symmetry-preserving attention networks which reflect the problem's natural invariances to efficiently find assignments without evaluating all permutations. This general approach is applicable to arbitrarily complex configurations and significantly outperforms current methods, improving reconstruction efficiency between 19\% - 35\% on typical benchmark problems while decreasing inference time by two to five orders of magnitude on the most complex events, making many important and previously intractable cases tractable. A full code repository containing a general library, the specific configuration used, and a complete dataset release, are avaiable at https://github.com/Alexanders101/SPANet

Farah Fahim, Benjamin Hawks, Christian Herwig et al.

Accessible machine learning algorithms, software, and diagnostic tools for energy-efficient devices and systems are extremely valuable across a broad range of application domains. In scientific domains, real-time near-sensor processing can drastically improve experimental design and accelerate scientific discoveries. To support domain scientists, we have developed hls4ml, an open-source software-hardware codesign workflow to interpret and translate machine learning algorithms for implementation with both FPGA and ASIC technologies. We expand on previous hls4ml work by extending capabilities and techniques towards low-power implementations and increased usability: new Python APIs, quantization-aware pruning, end-to-end FPGA workflows, long pipeline kernels for low power, and new device backends include an ASIC workflow. Taken together, these and continued efforts in hls4ml will arm a new generation of domain scientists with accessible, efficient, and powerful tools for machine-learning-accelerated discovery.

Claudius Krause, Michele Faucci Giannelli, Gregor Kasieczka et al.

We present the results of the "Fast Calorimeter Simulation Challenge 2022" - the CaloChallenge. We study state-of-the-art generative models on four calorimeter shower datasets of increasing dimensionality, ranging from a few hundred voxels to a few tens of thousand voxels. The 31 individual submissions span a wide range of current popular generative architectures, including Variational AutoEncoders (VAEs), Generative Adversarial Networks (GANs), Normalizing Flows, Diffusion models, and models based on Conditional Flow Matching. We compare all submissions in terms of quality of generated calorimeter showers, as well as shower generation time and model size. To assess the quality we use a broad range of different metrics including differences in 1-dimensional histograms of observables, KPD/FPD scores, AUCs of binary classifiers, and the log-posterior of a multiclass classifier. The results of the CaloChallenge provide the most complete and comprehensive survey of cutting-edge approaches to calorimeter fast simulation to date. In addition, our work provides a uniquely detailed perspective on the important problem of how to evaluate generative models. As such, the results presented here should be applicable for other domains that use generative AI and require fast and faithful generation of samples in a large phase space.

Qibin Liu, Chase Shimmin, Xiulong Liu et al.

We introduce a novel machine learning method developed for the fast simulation of calorimeter detector response, adapting vector-quantized variational autoencoder (VQ-VAE). Our model adopts a two-stage generation strategy: initially compressing geometry-aware calorimeter data into a discrete latent space, followed by the application of a sequence model to learn and generate the latent tokens. Extensive experimentation on the Calo-challenge dataset underscores the efficiency of our approach, showcasing a remarkable improvement in the generation speed compared with conventional method by a factor of 2000. Remarkably, our model achieves the generation of calorimeter showers within milliseconds. Furthermore, comprehensive quantitative evaluations across various metrics are performed to validate physics performance of generation.

Zhixing Jiang, Dennis Yin, Elham E Khoda et al.

This work introduces a highly efficient implementation of the transformer architecture on a Field-Programmable Gate Array (FPGA) by using the \texttt{hls4ml} tool. Given the demonstrated effectiveness of transformer models in addressing a wide range of problems, their application in experimental triggers within particle physics becomes a subject of significant interest. In this work, we have implemented critical components of a transformer model, such as multi-head attention and softmax layers. To evaluate the effectiveness of our implementation, we have focused on a particle physics jet flavor tagging problem, employing a public dataset. We recorded latency under 2 $μ$s on the Xilinx UltraScale+ FPGA, which is compatible with hardware trigger requirements at the CERN Large Hadron Collider experiments.

Elizabeth G. Campolongo, Yuan-Tang Chou, Ekaterina Govorkova et al.

Scientific discoveries are often made by finding a pattern or object that was not predicted by the known rules of science. Oftentimes, these anomalous events or objects that do not conform to the norms are an indication that the rules of science governing the data are incomplete, and something new needs to be present to explain these unexpected outliers. The challenge of finding anomalies can be confounding since it requires codifying a complete knowledge of the known scientific behaviors and then projecting these known behaviors on the data to look for deviations. When utilizing machine learning, this presents a particular challenge since we require that the model not only understands scientific data perfectly but also recognizes when the data is inconsistent and out of the scope of its trained behavior. In this paper, we present three datasets aimed at developing machine learning-based anomaly detection for disparate scientific domains covering astrophysics, genomics, and polar science. We present the different datasets along with a scheme to make machine learning challenges around the three datasets findable, accessible, interoperable, and reusable (FAIR). Furthermore, we present an approach that generalizes to future machine learning challenges, enabling the possibility of large, more compute-intensive challenges that can ultimately lead to scientific discovery.

Shitij Govil, Jack P. Rodgers, Yuan-Tang Chou et al.

Charged particle track reconstruction is a foundational task in collider experiments and the main computational bottleneck in particle reconstruction. Graph neural networks (GNNs) have shown strong performance for this problem, but costly graph construction, irregular computations, and random memory access patterns substantially limit their throughput. The recently proposed Hashing-based Efficient Point Transformer (HEPT) offers a theoretically guaranteed near-linear complexity for large point cloud processing via locality-sensitive hashing (LSH) in attention computations; however, its evaluations have largely focused on embedding quality, and the object condensation pipeline on which HEPT relies requires a post-hoc clustering step (e.g., DBScan) that can dominate runtime. In this work, we make two contributions. First, we present a unified, fair evaluation of physics tracking performance for HEPT and a representative GNN-based pipeline under the same dataset and metrics. Second, we introduce HEPTv2 by extending HEPT with a lightweight decoder that eliminates the clustering stage and directly predicts track assignments. This modification preserves HEPT's regular, hardware-friendly computations while enabling ultra-fast end-to-end inference. On the TrackML dataset, optimized HEPTv2 achieves approximately 28 ms per event on an A100 while maintaining competitive tracking efficiency. These results position HEPTv2 as a practical, scalable alternative to GNN-based pipelines for fast tracking.

Andrew Ferguson, Marisa LaFleur, Lars Ruthotto et al. · stanford

This community paper developed out of the NSF Workshop on the Future of Artificial Intelligence (AI) and the Mathematical and Physics Sciences (MPS), which was held in March 2025 with the goal of understanding how the MPS domains (Astronomy, Chemistry, Materials Research, Mathematical Sciences, and Physics) can best capitalize on, and contribute to, the future of AI. We present here a summary and snapshot of the MPS community's perspective, as of Spring/Summer 2025, in a rapidly developing field. The link between AI and MPS is becoming increasingly inextricable; now is a crucial moment to strengthen the link between AI and Science by pursuing a strategy that proactively and thoughtfully leverages the potential of AI for scientific discovery and optimizes opportunities to impact the development of AI by applying concepts from fundamental science. To achieve this, we propose activities and strategic priorities that: (1) enable AI+MPS research in both directions; (2) build up an interdisciplinary community of AI+MPS researchers; and (3) foster education and workforce development in AI for MPS researchers and students. We conclude with a summary of suggested priorities for funding agencies, educational institutions, and individual researchers to help position the MPS community to be a leader in, and take full advantage of, the transformative potential of AI+MPS.

Xiaohan Liu, ChiJui Chen, YanLun Huang et al.

Large-scale recordings of neural activity are providing new opportunities to study neural population dynamics. A powerful method for analyzing such high-dimensional measurements is to deploy an algorithm to learn the low-dimensional latent dynamics. LFADS (Latent Factor Analysis via Dynamical Systems) is a deep learning method for inferring latent dynamics from high-dimensional neural spiking data recorded simultaneously in single trials. This method has shown a remarkable performance in modeling complex brain signals with an average inference latency in milliseconds. As our capacity of simultaneously recording many neurons is increasing exponentially, it is becoming crucial to build capacity for deploying low-latency inference of the computing algorithms. To improve the real-time processing ability of LFADS, we introduce an efficient implementation of the LFADS models onto Field Programmable Gate Arrays (FPGA). Our implementation shows an inference latency of 41.97 $μ$s for processing the data in a single trial on a Xilinx U55C.

Philip Harris, Erik Katsavounidis, William Patrick McCormack et al.

Machine learning (ML) is becoming an increasingly important component of cutting-edge physics research, but its computational requirements present significant challenges. In this white paper, we discuss the needs of the physics community regarding ML across latency and throughput regimes, the tools and resources that offer the possibility of addressing these needs, and how these can be best utilized and accessed in the coming years.

Abdelrahman Elabd, Vesal Razavimaleki, Shi-Yu Huang et al.

The determination of charged particle trajectories in collisions at the CERN Large Hadron Collider (LHC) is an important but challenging problem, especially in the high interaction density conditions expected during the future high-luminosity phase of the LHC (HL-LHC). Graph neural networks (GNNs) are a type of geometric deep learning algorithm that has successfully been applied to this task by embedding tracker data as a graph -- nodes represent hits, while edges represent possible track segments -- and classifying the edges as true or fake track segments. However, their study in hardware- or software-based trigger applications has been limited due to their large computational cost. In this paper, we introduce an automated translation workflow, integrated into a broader tool called $\texttt{hls4ml}$, for converting GNNs into firmware for field-programmable gate arrays (FPGAs). We use this translation tool to implement GNNs for charged particle tracking, trained using the TrackML challenge dataset, on FPGAs with designs targeting different graph sizes, task complexites, and latency/throughput requirements. This work could enable the inclusion of charged particle tracking GNNs at the trigger level for HL-LHC experiments.

Allison McCarn Deiana, Nhan Tran, Joshua Agar et al.

In this community review report, we discuss applications and techniques for fast machine learning (ML) in science -- the concept of integrating power ML methods into the real-time experimental data processing loop to accelerate scientific discovery. The material for the report builds on two workshops held by the Fast ML for Science community and covers three main areas: applications for fast ML across a number of scientific domains; techniques for training and implementing performant and resource-efficient ML algorithms; and computing architectures, platforms, and technologies for deploying these algorithms. We also present overlapping challenges across the multiple scientific domains where common solutions can be found. This community report is intended to give plenty of examples and inspiration for scientific discovery through integrated and accelerated ML solutions. This is followed by a high-level overview and organization of technical advances, including an abundance of pointers to source material, which can enable these breakthroughs.

Xiangyang Ju, Daniel Murnane, Paolo Calafiura et al.

The Exa.TrkX project has applied geometric learning concepts such as metric learning and graph neural networks to HEP particle tracking. Exa.TrkX's tracking pipeline groups detector measurements to form track candidates and filters them. The pipeline, originally developed using the TrackML dataset (a simulation of an LHC-inspired tracking detector), has been demonstrated on other detectors, including DUNE Liquid Argon TPC and CMS High-Granularity Calorimeter. This paper documents new developments needed to study the physics and computing performance of the Exa.TrkX pipeline on the full TrackML dataset, a first step towards validating the pipeline using ATLAS and CMS data. The pipeline achieves tracking efficiency and purity similar to production tracking algorithms. Crucially for future HEP applications, the pipeline benefits significantly from GPU acceleration, and its computational requirements scale close to linearly with the number of particles in the event.

Michael James Fenton, Alexander Shmakov, Ta-Wei Ho et al.

Top quarks, produced in large numbers at the Large Hadron Collider, have a complex detector signature and require special reconstruction techniques. The most common decay mode, the "all-jet" channel, results in a 6-jet final state which is particularly difficult to reconstruct in $pp$ collisions due to the large number of permutations possible. We present a novel approach to this class of problem, based on neural networks using a generalized attention mechanism, that we call Symmetry Preserving Attention Networks (SPA-Net). We train one such network to identify the decay products of each top quark unambiguously and without combinatorial explosion as an example of the power of this technique.This approach significantly outperforms existing state-of-the-art methods, correctly assigning all jets in $93.0%$ of $6$-jet, $87.8%$ of $7$-jet, and $82.6%$ of $\geq 8$-jet events respectively.

Anders Andreassen, Shih-Chieh Hsu, Benjamin Nachman et al.

Histogram-based template fits are the main technique used for estimating parameters of high energy physics Monte Carlo generators. Parametrized neural network reweighting can be used to extend this fitting procedure to many dimensions and does not require binning. If the fit is to be performed using reconstructed data, then expensive detector simulations must be used for training the neural networks. We introduce a new two-level fitting approach that only requires one dataset with detector simulation and then a set of additional generation-level datasets without detector effects included. This Simulation-level fit based on Reweighting Generator-level events with Neural networks (SRGN) is demonstrated using simulated datasets for a variety of examples including a simple Gaussian random variable, parton shower tuning, and the top quark mass extraction.